Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00109 ATGTCAGAAGAAGAATTACACTTACCCGACGAGTGCTGGGAATTGGTATTGAAATTCCTCAAATCCCATCGTCACTTTGAACCTCTCTCTCTCGTCTCCACCCAATTCCTCTCCATCACCAACCGCCTCCGAATCTCCCTCACCGTATGCAACCCAACGCTCCCTTTTCTCCCCAACCTCTTCCTCAGATTCCCCTCCCTCACCTCCCTCGACCTCACGCGCCTCCACCACACCCATCTCCACGCGCTCCTCCTCCAAATCTCACGCGCCGCATTGCCCCTCCAATCGCTCAACCTCTCCGGCCACCCAACCATTCCTTCAAATGGGTTCCGACTTTTGCCCAAAAAGGTCACAACTTTGAAGTCCCTCACCTGTTCCCACATGGGTTCTCTCAAAAACTCCGATCTCCTCCTCATCGCCGAGTGTTTCCCTTTCCTCGAACACCTCGACCTTAGTTTCCCCGAAGACACCGACAATTCCACCACCCCCGTCTCCGATGTCGGCGTCAAGGCCCTCTCTTTGGCCCTCCCCAAGCTCCGCAGCGTTGACCTCTCCGGCAACTTCTTCATCAACGACCCTTCGATTCTCAGCCTCTGCAAAAACTGCGAGTTTCTCGAGGAAGTTACGATCTTCGAGTGCCACTTCATCACGCAACGTGGCATCGCTTCCGCGATCAGGGAGAGACCGTGTTTGCGTGCGTTCCGCGTTAGCAACTTCGGGTGTGGAACCAAAAAAGGGGACTTTTTGAGACCCTGCGTGACTTCTAATTTCATTGGCGCGTTGGTGAGTTTGAAGGGCTTGACTTGTCTCGATTTGTCGTCTTCCTCTATCTCCGATGAGTTGCTATGTTGTGTTGCGGAGGAAGGGATTCCTCTGAAGAAGCTTGTTTTACAAGGTTGTTGTAACTATAGCTATGTTGGAGTGCTTTGCTTGTTGTCCACGTGTCAGTCTCTGGAGCATTTGGATCTTCAAAACGCTGAGTTTCTGTGTGATCAGCGTGTGGAAGAGTTGTGTGAGTTTCTTGGGAATTTGGTGTCTATAAATGTTAGTGGTTGTAGGATGTTAACTGATTTAGCTTTGTTTGCACTCTTTAGGAAGTGTCCTTTGTTGAATGAGATCAGAATGGGGGCAACAGATGTTGGGAAAAGGATGGTTGATGATGATTTGGTGAATGGTGTTGTGAATTGTCATGTGAAGTCTCTCTATTTGGGAAACAGTTACTTGTTGAGGGATGAAAGTGTTGAAGTGTTTGCTTCTGTTTGCCCCAATTTGGAGGTTCTTGATTTGAGCTGTTGCTGTGGCATATCTGAAGGTGTTGTTGAGGTTATAAGGAGGTGTTGTGAGGTTAGGCATTTGAGCTTGGCCTTCTGTTCAGGAGTGAAGTTAGCTGGGTTGAGCTTTGAAGTTCCAAAACTTGAGGAGTTGATCTTGTCACGATCAGGAGTTGATGATGAAATGCTTTCTGTGATCTCAAAGTATTGTCGGGGGCTGCTGAATTTGGACTTGGAAAATTGCTCTCGTGTCACAGCCAAGGGAGTGAGGCAAGTGGTGGAGAAGTGCACCCGATTGAGAGAGATTAATTTGGGGTCTTGTTATGAAGTGGGTGCCAGTGTTGTTGCTTGGATGGTATTTTCAAGGCCATCATTGAGAAGGATAATGGCTCCCCCGAGTTTTGATCTCAGTGATGGCCAGAAGGAACTCCTCTTGCGTCATGGATGCCTTGTTTGCTAA 1731 0.487 MSEEELHLPDECWELVLKFLKSHRHFEPLSLVSTQFLSITNRLRISLTVCNPTLPFLPNLFLRFPSLTSLDLTRLHHTHLHALLLQISRAALPLQSLNLSGHPTIPSNGFRLLPKKVTTLKSLTCSHMGSLKNSDLLLIAECFPFLEHLDLSFPEDTDNSTTPVSDVGVKALSLALPKLRSVDLSGNFFINDPSILSLCKNCEFLEEVTIFECHFITQRGIASAIRERPCLRAFRVSNFGCGTKKGDFLRPCVTSNFIGALVSLKGLTCLDLSSSSISDELLCCVAEEGIPLKKLVLQGCCNYSYVGVLCLLSTCQSLEHLDLQNAEFLCDQRVEELCEFLGNLVSINVSGCRMLTDLALFALFRKCPLLNEIRMGATDVGKRMVDDDLVNGVVNCHVKSLYLGNSYLLRDESVEVFASVCPNLEVLDLSCCCGISEGVVEVIRRCCEVRHLSLAFCSGVKLAGLSFEVPKLEELILSRSGVDDEMLSVISKYCRGLLNLDLENCSRVTAKGVRQVVEKCTRLREINLGSCYEVGASVVAWMVFSRPSLRRIMAPPSFDLSDGQKELLLRHGCLVC 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00109 576 FunFam F-box/LRR-repeat protein 20 467 554 - -
Pumo7g00109 576 Gene3D Ribonuclease Inhibitor 382 464 IPR032675 -
Pumo7g00109 576 Pfam Leucine Rich repeat 421 435 IPR001611 GO:0005515
Pumo7g00109 576 SUPERFAMILY RNI-like 7 239 - -
Pumo7g00109 576 SMART LRR_CC_2 520 544 IPR006553 -
Pumo7g00109 576 SMART LRR_CC_2 315 340 IPR006553 -
Pumo7g00109 576 SMART LRR_CC_2 202 227 IPR006553 -
Pumo7g00109 576 SMART LRR_CC_2 494 519 IPR006553 -
Pumo7g00109 576 SMART LRR_CC_2 176 201 IPR006553 -
Pumo7g00109 576 SMART LRR_CC_2 91 116 IPR006553 -
Pumo7g00109 576 SMART LRR_CC_2 341 366 IPR006553 -
Pumo7g00109 576 SMART LRR_CC_2 421 445 IPR006553 -
Pumo7g00109 576 PANTHER UNCHARACTERIZED 387 536 - -
Pumo7g00109 576 Gene3D Ribonuclease Inhibitor 4 357 IPR032675 -
Pumo7g00109 576 Gene3D Ribonuclease Inhibitor 465 562 IPR032675 -
Pumo7g00109 576 SUPERFAMILY RNI-like 221 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00109 Pumo-Chr7 1282448 1284735 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00109 K10268 - gmx:100819538 996.882