Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00097 ATGCCGCTGATATTTCCGAAAAGCGATTCGATCCAGATTCGCGAGGTGTGGGACGATAACCTGGAAGAGGAGTTCGCGTTGATTCGCGAAATCGTGGACGATTACCCTTACATCGCCATGGACACGGAGTTTCCGGGGATCGTTCTCCGACCGGTGGGGAATTTCAAGAACAGCTACGATTACCATTACCAAACCCTAAAGGACAACGTCGACATGCTCAAACTCATCCAATTGGGCCTCACCTTCTCCGACGAGCACGGCAACCTCCCCACGTGCGGGGACTCCGACACGTGCTGCATCTGGCAATTCAACTTCCGCGAATTCAACGTCAACGAGGACGTCTTCGCCAACGACTCCATCGAGCTTTTGCGCCAGAGCGGCATCGATTTCAAGAGGAACAACGAAAACGGCATCGATGCGCACCGTTTCGGGGAGCTTCTCATGTCCTCTGGGATTGTTTTGAATGATAACGTTCATTGGGTTACTTTCCATAGCGGTTATGATTTCGGGTACTTGTTGAAGCTTTTGACGTGTCAGGATTTGCCTGATACGCAAGTGGGGTTCTTCAATTTGATCAACATGTACTTCCCCACTGTGTATGACATCAAGCACCTTATGAAGTTTTGCAACAGCCTCCATGGAGGCTTGAACAAGCTCGCTGAGTTGTTGGAGGTTGAGAGGGTTGGGATTTGCCACCAGGCTGGTTCCGATAGCTTGCTCACTTCCTGTACGTTCAGGAAATTGAAGGATAATTTCTTTAGTGGCTCCTTGGAGAAGTATGCAGGTGTCTTGTATGGGTTAGGTGTTGACAATGGACAGGGTTCTCATTGA 831 0.497 MPLIFPKSDSIQIREVWDDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDYHYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGDSDTCCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKRNNENGIDAHRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQDLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKDNFFSGSLEKYAGVLYGLGVDNGQGSH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00097 276 Pfam CAF1 family ribonuclease 16 138 IPR006941 -
Pumo7g00097 276 SUPERFAMILY Ribonuclease H-like 3 269 IPR012337 -
Pumo7g00097 276 Gene3D - 1 271 IPR036397 GO:0003676
Pumo7g00097 276 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 268 IPR039637 GO:0004535|GO:0030014
Pumo7g00097 276 Pfam CAF1 family ribonuclease 161 221 IPR006941 -
Pumo7g00097 276 FunFam Putative CCR4-associated factor 1 7 4 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00097 Pumo-Chr7 1158424 1160565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00097 K12581 - gmx:100789409 561.222