Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00039 ATGGAGCGAGGCATAAGCATTGTGGCGTTGTTGATATTGTCCAGCACATTCTTTGCATGCGCTACTCAACAGCAAGGGCCGAGTTACCTGAAGATGGTGGTGAACGCGAGCGAGTTACCGTTGGAAGATTACTACGACTACATCATCGTGGGTGGCGGCACTGCGGGGTGCCCACTGGCGGCGACACTGTCGCAGTCGTTTCGGGTGCTTTTGCTGGAACGCGGAGGCGTTGGGCGCGGCAACCCCAACTTGATGAACCAAGAAGGCTTCTTGGCCAACCTCTTGAACACCGAAAGCGGAGACTCTCCCGCGCAATCTTTCATTTCCGAAGAGGGAGTCCCCAACGCGCGTGGCCGCGTTCTTGGCGGCAGCAGCGCCATCAACGCCGGCTTCTACAGCCGAGCCGACGGGGATTTCTTCGGCAGGTCGGGCTTGCCCTGGAACCTCACGCTGGTCAAGGAATCCTACCAATGGGTGGAGAAAGAAATCGTGTACAGACCGAATCTGAAGACGTGGCAATCGGCGGTTCGCGATGGGTTGCTGGAAGCAGGGGTTACTCCCTACAACGGTTTCACTCTGGACCACGCGAAGGGAACCAAGATTGGGGGGTCCACATTCGACAGCGCTGGCAGAAGACACACCTCTGCGGATCTTTTGAGATACGCAACTCCATCCAACATCAAGGTCGCCGTTTACGCCACCGTGGAGAGGCTCCTTCTGGCTGCTTCGGCCGCAATCGGAGTCCTCTACAGAGACCAAACAGGGAGGTACCACCACGCATTCTTGCGGGAACACGGTGAGGTCATTCTCTCCGCCGGTGCCATCGGAAGCCCTCAGCTTCTTCTTCTCAGCGGGATCGGTCCCAGGCCTTATCTCTCTTCCTGGGGGATTCCCGTCGCTCACCACCTTCCCTACGTAGGCCACTTCCTCTACGATAATCCCAGGAACGGAATTACGATTCTGCCCTCGCTTCCACTCGAGCATTCTCTCATCCAAGTCGTGGGGATTACCGACTCCGGCGCTTACATCGAGGCCGCTTCCAACGTGGTTCCTTTCACGTCCCCTCCACACACTGCCTTCGTCCTCCGTTCCCCGCTCTACCTGACTGTAGCCACTCTCATTTCCAAGATTTCGGGGCCACTCTCCAGCGGATTTCTCAGACTGGCTTCCACGGACGTGAACGTGAATCCTGTTGTGAGATTCAATTACTTCAACAACCCCGTTGACGTGGAGCGCTGCGTGAACGGGACGAGGAAGATAGCGGAGATCCTCGGGAGCAGGGCTTTGAAGGATTTCAAGTTCAGCAACTGGTTCGGGGAGCGAGACTTCAGGTTCATTGGGCCCCCTTTGCCACTTCACCAGACGGACTTCCCTCGCATGGCGGATTTTTGCCGCCAGACAGTCAGTACCATATGGCACTACCATGGAGGCTGCGTCGTTGGCAGGGTCGTTGATCCTAATCTCAAGCTCATTGGAATTGCTTCCCTTCGTATTGTTGATGGATCCGTCTTTAGCGTATCGCCGGGAACCAATCCTCAGGCCACCCTAATGATGCTAGGAAGGTATTTTGGGCTCAACATAATCAGAGAAAGGGACGCATAA 1602 0.5605 MERGISIVALLILSSTFFACATQQQGPSYLKMVVNASELPLEDYYDYIIVGGGTAGCPLAATLSQSFRVLLLERGGVGRGNPNLMNQEGFLANLLNTESGDSPAQSFISEEGVPNARGRVLGGSSAINAGFYSRADGDFFGRSGLPWNLTLVKESYQWVEKEIVYRPNLKTWQSAVRDGLLEAGVTPYNGFTLDHAKGTKIGGSTFDSAGRRHTSADLLRYATPSNIKVAVYATVERLLLAASAAIGVLYRDQTGRYHHAFLREHGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVAHHLPYVGHFLYDNPRNGITILPSLPLEHSLIQVVGITDSGAYIEAASNVVPFTSPPHTAFVLRSPLYLTVATLISKISGPLSSGFLRLASTDVNVNPVVRFNYFNNPVDVERCVNGTRKIAEILGSRALKDFKFSNWFGERDFRFIGPPLPLHQTDFPRMADFCRQTVSTIWHYHGGCVVGRVVDPNLKLIGIASLRIVDGSVFSVSPGTNPQATLMMLGRYFGLNIIRERDA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00039 533 Pfam GMC oxidoreductase 380 521 IPR007867 GO:0016614
Pumo7g00039 533 PANTHER OSJNBA0019K04.7 PROTEIN 14 531 - -
Pumo7g00039 533 Pfam GMC oxidoreductase 45 313 IPR000172 GO:0016614|GO:0050660
Pumo7g00039 533 Gene3D - 45 520 IPR036188 -
Pumo7g00039 533 SUPERFAMILY FAD-linked reductases, C-terminal domain 310 477 - -
Pumo7g00039 533 ProSitePatterns GMC oxidoreductases signature 2. 273 287 IPR000172 GO:0016614|GO:0050660
Pumo7g00039 533 PIRSF Alcohol_oxidase 365 533 IPR012132 GO:0050660
Pumo7g00039 533 PIRSF Alcohol_oxidase 20 351 IPR012132 GO:0050660
Pumo7g00039 533 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pumo7g00039 533 Gene3D - 165 470 - -
Pumo7g00039 533 SUPERFAMILY FAD/NAD(P)-binding domain 30 333 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00039 Pumo-Chr7 629468 631258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00039 10 532 Miscellaneous Gene Families AT5G51950 46.397 8.98e-152 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00039 K08248 - gmx:100820069 963.755