Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00012 ATGTGGAGGCTGAAGATAGCAGATGGTGGAAATGACCCATACATATTCAGCACAAACAATTTTGTGGGAAGGCAGATATGGGAGTTTGATCCTGAAGCAGGCACTCCTGAGGAACGGGCCCAGGTTGAAGCAGCTCGTAAGGATTTCTATGACAACCGTTTCAAGGTCAAGCCCTGTGCTGACCTCCTATGGCGTTTTCAGATTCTGAGAGAAAATAACTTCAAACAAACAATACCTGCTGTGAAGATAGAAGATGGAGAGGAAATAACATACGAAGAAGTCACAACCGCCATGAGAAGGGGCGCACATCACCTAGCGGCATTGCAGACCAGTGATGGCCATTGGCCTGCACAAATTGCAGGTCCTCTGTTTTTTCTTCCTCCTTTGGTTTTCTGTATGTATATTACAGGGCATCTTGAATCAGTGTTTCCAGAAGAGTATCGAAAAGAAATTCTTCGCTACATATACTATCACCAGAATGAAGATGGAGGATGGGGATTACACATAGAAGGTCATAGCACCATGTTTTGTACTGCACTAAACTATATATGTATGCGGATTCTTGGAGAAGAACCTAATGGAGGTCATGATAATGCTTGTGCTAGAGCAAGAAAGTGGATTCGAGATCATGGTGGTGTAACACATATACCTTCATGGGGAAAAACTTGGCTTTCGATACTTGGTGTATTTGATTGGTGCGGAAGCAACCCAATGCCCCCAGAGTTTTGGATCCTTCCTTCGTTTCTTCCTATGCATCCAGCTAAGATGTGGTGTTACTGTCGATTGGTATACATGCCTATGTCTTACTTATATGGGAAGAGGTTTGTGGGTCCAATCACACCACTCATCTTACAATTAAGAGAAGAGCTATTTACTCAACCTTACGAAAAAGTTAATTGGAAGAAAGCGCGTCACCAATGTGCAAAGGAAGATCTTTACTATCCTCATCCTTTGATACAAGACCTAATATGGGATAGTTTATACATATTCACTGAGCCATTACTTACTCGTTGGCCTTTCAACAAGTTGATTAGAGAAAAAGCCCTTCAAGTAACAATGAAGCATATTCATTACGAAGATGAGACTAGTCGATACATAACCATTGGTTGTGTGGAAAAGGTTTTATGTATGCTTGCTTGTTGGGTGGAAGATCCAAATGGAGATGCTTTCAAGAAGCATCTTGCAAGGGTACCAGATTACTTATGGGTTTCTGAAGATGGAATGACCATGCAGAGCTTTGGTAGCCAAGAATGGGATGCTGGCTTTGCTGTTCAAGCTTTGCTTGCCACTAACCTAACTGAAGAAATTGGCCCCACACTTGCAAAAGGACATGATTTCATCAAGAAGTCTCAGGTGAAGGATAATCCTTATGGAGATTTTAAGAGTATGTATCGTCATATTTCTAAAGGTTCTTGGACATTCTCTGATCAAGATCATGGATGGCAAGTTTCTGATTGCACTGCAGAAGGTTTAAAGTGTTGTCTACTTTTATCAATGTTGCCACCAGAGATTGTGGGAGAAAAAATGGAACCTGGACAGCTATATGATTCAGTCAATGTCCTGTTGTCGCTTCAGAGTAAAAAAGGTGGTTTAGCAGCATGGGAGCCTGCAGGAGCTCAAGAGTGGTTAGAATTACTCAATCCCACAGAATTTTTTGCGGACATTGTAGTTGAACATGAATACGTTGAGTGCACTGGATCTGCCATTCAAGCTTTAGTTTTGTTCAAGAAGCTATATCCAGGTCATAGGAAGAAAGAGATAGAGAATTTCATTACCAATGCTGTTCGATTCCTTGAAGATACACAAACAGCTGATGGTTCATGGTATGGAAATTGGGGAGTTTGCTTCACTTATGGCTCTTGGTTTGCACTTGGCGGTCTAGCAGCTGCCGGCAAGACTTACACCAATTGTGCTGCCATTCGCAAAGCTGTTAAATTTCTACTTACAACACAGAGAGAGGACGGTGGATGGGGAGAGAGTTATCTTTCAAGCCCAAAAAAGATATATGTACCTCTAGAAGAAAGTCGATCAAATGTTGTACATACAGCATGGGCTCTTATGGGACTAATTCATGCTGGACAGGCAGATAGAGACCCTACTCCTCTTCATCGTGCTGCAAAGTTGCTCATTAATTCTCAATTAGAAGAGGGCGATTGGCCCCAACAGGTGCATATCAGTCCTTTAATATTGAAAATTTCTTGTATTTGTGTACATGCTTAA 2220 0.418 MWRLKIADGGNDPYIFSTNNFVGRQIWEFDPEAGTPEERAQVEAARKDFYDNRFKVKPCADLLWRFQILRENNFKQTIPAVKIEDGEEITYEEVTTAMRRGAHHLAALQTSDGHWPAQIAGPLFFLPPLVFCMYITGHLESVFPEEYRKEILRYIYYHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEEPNGGHDNACARARKWIRDHGGVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFTQPYEKVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLIREKALQVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARVPDYLWVSEDGMTMQSFGSQEWDAGFAVQALLATNLTEEIGPTLAKGHDFIKKSQVKDNPYGDFKSMYRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSMLPPEIVGEKMEPGQLYDSVNVLLSLQSKKGGLAAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFITNAVRFLEDTQTADGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEESRSNVVHTAWALMGLIHAGQADRDPTPLHRAAKLLINSQLEEGDWPQQVHISPLILKISCICVHA 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00012 739 Pfam Squalene-hopene cyclase N-terminal domain 100 402 IPR032697 -
Pumo7g00012 739 NCBIfam squalene/oxidosqualene cyclases 97 723 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pumo7g00012 739 SFLD Prenyltransferase Like 2 91 723 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pumo7g00012 739 Gene3D - 119 414 - -
Pumo7g00012 739 FunFam Uncharacterized protein 119 349 - -
Pumo7g00012 739 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
Pumo7g00012 739 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 724 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pumo7g00012 739 FunFam Terpene cyclase/mutase family member 389 735 - -
Pumo7g00012 739 ProSitePatterns Terpene synthases signature. 605 619 IPR002365 GO:0016866
Pumo7g00012 739 Gene3D - 491 724 - -
Pumo7g00012 739 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 724 IPR008930 -
Pumo7g00012 739 Pfam Squalene-hopene cyclase C-terminal domain 418 724 IPR032696 -
Pumo7g00012 739 CDD SQCY_1 98 722 IPR018333 GO:0005811|GO:0016104|GO:0016866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00012 Pumo-Chr7 363039 371828 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00012 K15813 K15818 gmx:547702 1487.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00012 7 363039 371828 Pumo7g00012 7 363039 371828 ECH