Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00009 ATGGCGGCAACCCAACCACCGCAGGGTCCGGATCGTACCACCGAAGAGCTAGCAGCCGAACCAGATAACTTGAAGGAGCAGGTTACAGCAACTATAGGTCATTCAAGGGAGACCACAAGTCAATCAGGATCTTTAGGTTCAGGTGGAGATTGTCCTCTGTATCCTCCTAATGTGTATGCTCCCCAAGCCCAGGCTTTCTACTATAGAGGTTTTGACAATGGCAATGGTGAATGGGATGAATATTCTTCATATGTCAATTCTGAGGGATTAGACATTGGATCTCCTGGTGTCTACAATGAAAATCCATCTCTTATTTTCCATTCTGGGTATGGCTTCAACCCACAAATGCCTTATGGACCATATTCCCCAGTTACCACACCTTTGCCTTCTGTAGGTGCAGACACACAATTATATTCCCCTCAGCAATTTCCATACACTGGGCCACCTTATTATCATCAGCTGGTTCCTCCTAGCTTACCATATCTTAATTCACCTACTCCAGTTTCGCAGCCAGAGCTCACCAACCTGGTAGGTATTGACCAACAAGTTGATAACATGTTTTTTGGACCAAGAGCGGGCTATCCATCAGTGGGATCTTTTGGTAGAGGCAACTTTCCTGTAGCACCTGGTTCCTTTGGCTTTCATGATTCCCAACAAGGATTTGAAGGATCAAGATCTGGTGGAATCTGGTCAGATTGCTCAAAACCCTCGGAAAGACAGAGATCTTTGATGCCTCTATCGCCATCTGTTTCTCCACAGCCAATGGGCTCACTTGGGTCATTTGGGCCGAGTGTTGGAATGGCTTCTCATCAACAGCAATCATTGTATGGGTTTGAATCTGGTTCAAACTCCTATGGTAGAGGCTACCTGCCTAACCAGGGCTCTAGCTTTGGAGGCACTTCCATTTCCAATCTTAATGATAGGAGTTGTGCTTCTCTTGAAAATAGCCGGCGGCAAGGGAGGCCAACTGCTTCTCTTTGCAATTGTAATGGTACTCTTGATATCCTTAGTGAGCAGAACCGAGGACCAAGGGCCTCAAAGTTGAAAAATCAAATTTCAGCTGAAAATAATTCTGTGGATAGTAGTAAAAATAGTGCATCCACTGCCAAGTTCCAAAATGAATCACTCAATCGGTCAGATTTTGCCACAGATTACAAAGATGCCAAATTTTTTGTCATCAAATCTTACAGTGAAGATAATGTTCACAAGAGCATTAAATATGGTGTCTGGGCTAGTACACCAAATGGAAACAAGAAGTTAGATGCTGCATATCGCCAAGCAATGGAGAAGCAAGATGCCTGTCCTATATTTCTCTATTTTTCGGTAAATGCTAGTGCTCAATTCTGTGGGGTAGCTGAAATGGTTGGACCTGTCAATTTTGACAAGAGTGTGGACTTCTGGCAGCAAGATAAGTGGAGTGGGCAGTTTCCCGTGAAGTGGCACATAATTAAAGATGTTCCAAACAGTCAGTTCCGTCACATTGTTCTTGAAAATAATGATAACAAGCCTGTGACTAACAGTCGAGATACTCAGGAGGTGAAGTTGCCACAGGGGATTGAAATGTTGACCATTTTTAAAAACTATGAAACTGATGTGTCCATCCTGGATGATTTTGATTTCTATGAAGACCGGCAGAAGGCTATGCAAGAACGGAAGGCAAGGCAGCAAAGCAGCATGATGGCTACTGGATTAGTTGGAGAAAATGAACATAGGAATTCTGCTAACACTACTGGTGATTTCATGAAGCAGATGTCAAAGAGCTTTGCTCTAGTTGTCCGCTTAGATGAGAATAACAAGGAAGTTGCTGCAGATACAGATAGTTTAGTCTCTCATGGCCACATTGGCAATGTAGTTAAACCTGATGATGGTCAATCAGTGACTGCCTCTTCAACTCAAACCAGTTAG 1905 0.4357 MAATQPPQGPDRTTEELAAEPDNLKEQVTATIGHSRETTSQSGSLGSGGDCPLYPPNVYAPQAQAFYYRGFDNGNGEWDEYSSYVNSEGLDIGSPGVYNENPSLIFHSGYGFNPQMPYGPYSPVTTPLPSVGADTQLYSPQQFPYTGPPYYHQLVPPSLPYLNSPTPVSQPELTNLVGIDQQVDNMFFGPRAGYPSVGSFGRGNFPVAPGSFGFHDSQQGFEGSRSGGIWSDCSKPSERQRSLMPLSPSVSPQPMGSLGSFGPSVGMASHQQQSLYGFESGSNSYGRGYLPNQGSSFGGTSISNLNDRSCASLENSRRQGRPTASLCNCNGTLDILSEQNRGPRASKLKNQISAENNSVDSSKNSASTAKFQNESLNRSDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNKKLDAAYRQAMEKQDACPIFLYFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLPQGIEMLTIFKNYETDVSILDDFDFYEDRQKAMQERKARQQSSMMATGLVGENEHRNSANTTGDFMKQMSKSFALVVRLDENNKEVAADTDSLVSHGHIGNVVKPDDGQSVTASSTQTS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00009 634 CDD YTH 389 525 IPR007275 GO:0003723
Pumo7g00009 634 FunFam YTH domain family 1, isoform CRA_a 367 540 - -
Pumo7g00009 634 MobiDBLite consensus disorder prediction 1 49 - -
Pumo7g00009 634 MobiDBLite consensus disorder prediction 217 266 - -
Pumo7g00009 634 Gene3D ph1033 like domains 363 540 - -
Pumo7g00009 634 MobiDBLite consensus disorder prediction 338 367 - -
Pumo7g00009 634 Pfam YT521-B-like domain 388 526 IPR007275 GO:0003723
Pumo7g00009 634 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 77 605 IPR045168 -
Pumo7g00009 634 MobiDBLite consensus disorder prediction 216 266 - -
Pumo7g00009 634 MobiDBLite consensus disorder prediction 28 47 - -
Pumo7g00009 634 ProSiteProfiles YTH domain profile. 388 525 IPR007275 GO:0003723
Pumo7g00009 634 MobiDBLite consensus disorder prediction 615 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00009 Pumo-Chr7 298015 311894 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00009 K20102 - gmx:100816860 1237.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00009 7 298015 311894 Pumo7g00009 7 298015 311894 ECH