Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00008 ATGACGGGGGCTGAAGGCCCAAGCTACACAGTAGATGATGCTCTTGTGGCTTTGGGTTTTGGAAATTTCCAAATTCTCGTGCTTGCTTATGCTGGTGTTGGTTGGGTTTCAGAAGCAATGGAAATGATGTTACTCTCTTTTGTAGGCCCTGCAGTTCAAACTGCATGGAGTCTTTCCTCTCATGAAGAGAGTTTGATAACCAGTGTGGTTTTTGCTGGCATGCTAATCGGGGCATACTCATGGGGCATTGTTTCAGATAAACATGGAAGGAGGAAAGGATTCCTTATCACAGCGACAGTTACTGCTTTGGCTGGTTTTCTTAGTGCATTTGCTCCTAACTATTTATTATTAATTGCCCTCCGTTCTCTGGTTGGTATTGGTTTGGGAGGTGGCCCTGTATTATCATCTTGGTTTCTAGAGTTTGTTCCTGCTCCCAATAGAGGTACCTGGATGGTTGTCTTTTCAGCATTTTGGACTCTTGGTACAATTTTTGAGGCCTCACTTGCATGGATTGTGATGCCAAAACTGGGTTGGAGATGGCTTCTTGCACTGTCTTCTCTTCCCACATCTTTCCTTCTTCTGTTCTACAAAATGACTCCTGAGTCACCAAGATACCTATGCTTGAAAGGTAGAACAGCTGATGCAATTAATGTTTTGGAGAAAATAGCAAGAGTAAATGGAAGAGAACTTCCTTCCGGTATCCTTGTTTCTGACCATGAAATTGAGTTACACAAAATTGATAACCCTTCAGAGGACGCACGCTTGCTCTCACCAAGAACAAATGAAGTTGAACATCCTAAAGGAATAGTTTCCAATTTAGGTGGTATCTCATCGTTGTTAGTGCTTCTCTCACCAAAATTGGCAAGGTCAACCCTTCTATTATGGGCTGTGTTCTTTGGTAATGCTTTTTCGTATTATGGCCTTGTTTTGTTGACCACTGAGTTGAACGGACATAGTAAATGCATGTCACATAAATTACAGACAGAGAAGTCCCAGGATGTTAGATACAAGAGTGTTTTTATTGCTAGTTTTGCAGAGCTACCTGGGCTCCTCTTGTCAGCTGCAGCAGTAGATAAACTCGGTCGCAAACTCTCAATGTCAACCATGTTCTTCATGTGCTGTATTTTCCTTCTCCCATTAATATTCTATCTGCCTGAAGGCCTAACAACGAGCCTTTTATTTCTAGCTCGCATATGCATCACAGCAACCTTCACAATTGTGTATATATATGCACCAGAGATGTACCCAACATCAGTTAGAACAACTGGTGTGGGAATTGCAAGTTCGGTGGGCAGAATTGGTGGAATGATATGTCCTTTGGTAGCTGTGGGGTTAGTACATGGATGTCATCAAACTGCAGCTGTCATTCTGTTTGAGATCGTAGCTCTTCTTTCAGGAATATGTGTCATGTTCTTCCCGGTTGAGACCATGGGCCAAGAACTACGAGATAGTGTGCAAGTCTAA 1464 0.4262 MTGAEGPSYTVDDALVALGFGNFQILVLAYAGVGWVSEAMEMMLLSFVGPAVQTAWSLSSHEESLITSVVFAGMLIGAYSWGIVSDKHGRRKGFLITATVTALAGFLSAFAPNYLLLIALRSLVGIGLGGGPVLSSWFLEFVPAPNRGTWMVVFSAFWTLGTIFEASLAWIVMPKLGWRWLLALSSLPTSFLLLFYKMTPESPRYLCLKGRTADAINVLEKIARVNGRELPSGILVSDHEIELHKIDNPSEDARLLSPRTNEVEHPKGIVSNLGGISSLLVLLSPKLARSTLLLWAVFFGNAFSYYGLVLLTTELNGHSKCMSHKLQTEKSQDVRYKSVFIASFAELPGLLLSAAAVDKLGRKLSMSTMFFMCCIFLLPLIFYLPEGLTTSLLFLARICITATFTIVYIYAPEMYPTSVRTTGVGIASSVGRIGGMICPLVAVGLVHGCHQTAAVILFEIVALLSGICVMFFPVETMGQELRDSVQV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00008 487 ProSitePatterns Sugar transport proteins signature 1. 353 368 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo7g00008 487 Pfam Sugar (and other) transporter 351 482 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pumo7g00008 487 Pfam Sugar (and other) transporter 59 225 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pumo7g00008 487 SUPERFAMILY MFS general substrate transporter 14 482 IPR036259 -
Pumo7g00008 487 Gene3D MFS general substrate transporter like domains 21 486 IPR036259 -
Pumo7g00008 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 477 IPR020846 GO:0022857
Pumo7g00008 487 FunFam Organic cation/carnitine transporter 7 22 478 - -
Pumo7g00008 487 PANTHER SYNAPTIC VESICLE GLYCOPROTEIN 2 8 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00008 Pumo-Chr7 289078 294160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00008 49 485 Organic Solute Cotransporters AT3G20660 26.667 1.79e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00008 - - gmx:100786568 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00008 7 289078 294160 Pumo7g00008 7 289078 294160 ECH