Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03079 ATGATGCAACGCATGGTTGATCATGCTCTTGGTGTTGCTAAAGAGTCACTGAAGGCAATTACTTATGAGTCCTTAAACAATATTGTGAGGCTAATCAACGGAGTATCAGCCCTTTTGTTGGCATTTTTACCTGGGAAAGCTAATATACTTGAAGGTATCCATGGCTGGGAACTCAAGCCGACTTTCAGGGGACCGCGATTTCCACGTTGGATGGAGAATGGTGTATCCTCTTTCAACCAGTTCATCCATGAACTTTCTTTGGATTCTGATAACTCAAGCCCTGAATACTCATCTGGAGAAGAAGATAGTGATAGATTCGATTACCCTTCATCTCCTGCATCTCAAAGTTCTAGAACCTCAGAAGCTGGTTTTACCAAGTACAGTAGGCATCAGATGGATTGGGTCCAGTATATCTTACTTTTGATTTTATTTCCTGTAAAGTTATTGCTGTGGATTCCACTTCATCTTTTCCGGTTAGTTTATTATGGGGTGTCAAAAGCCATGTCTATCTCTGGAAATAAGCACCCTTCACATTTACATGCACATAAGAGGGTGCTAAGCCTCAAGGATCATATTATCCACCGTGCCACTGATAGGAGACGTGGAGTTGTAGAGGATCTTCATCTAGGCATAGAGTTATCTATAGAAGCTGTCTTCGATGTTGTTCACAAGGCAGCACATCTTCTTCTTTCCCCTTCAGAAGCTTTTGGGACATTATTCAGGTTGTTTTCATCTCATGAAAGTGGTACTATAGAAGATAGTGATGGTGTTGAGGACGCCCCCGTTTATACAGCTACACTAGGAGAGAATGACCCAACGCCTACAGAGAGGAATGTCAAGTATCAGCCTCTGAATACCGATGCCCGGACATGCCAAGATGTCATAACAGACCTTGGGTATCCATATGAAGCCATTCGTGTGATCACTGCTGATGGATATATTCTTCTTTTGGAAAGAATACCTAGGCGAGATTCAAGGAAAGCTGTTTATCTTCAGCATGGGGTTTTGGATTCATCAATGGGTTGGGTATCTAATGGAGTTGTTGGCTCTCCAGCTTTTGCAGCCTATGACCAAGGGTATGATGTATTTCTAGGGAATTTTCGTGGTTTGGTTTCACGGGAACATGTCAACAAGAACATATCATCACGTCAATACTGGCGGTATTCCATCAATGAGCACGGGACTGAGGATATTCCTGCTATGATAGATAAAATCCATGAAGTAAAAACTGCTGAATTGAAGCTTAATAAACCTGATATAGAGGAGGAAACTGATGATGATCAGCTTTACAATCTTTGTGCAATTTGCCATAGTTTGGGAGGAGCTGCTATGATGATGTATGTTATTACTCGAAGGATAGAAGGGAAACCCCATAGACTTTCAAGATTAGTTCTATTATCCCCGGCTGGTTTTCATGACGACTCTAACATAGTTTTTTCTATGGCGGAGCTTCTATTAGTTATACTGGCTCCTGTTTTGTCTCTTCTTGTGCCTGCCTTCTATATACCAACCACATTCTTTCGTATGCTTGTCAACAAGTTAGCCCGGGATCTGCATAACCTACCTGCAGTTGGAGGATTGGTTCAAACTTTAATGAGTTATGTTGTTGGTGGAGACAGTTCAAACTGGGTTGGAGTTTTAGGATTACCACATTATAACACGAATGATATGCCGGGAGTATCTTTTCGTGTTGTTCTCCATCTTGCACAAATGAAGCGCACCGGAAGGTTCAGAATGTTTGATTATGGGAGTGCATCTGCCAATATGAAAGTGTATGGTTCGCCTATGCCTTTGGACTTTGGTGAACACTATGGACTCATAAACATTCCTGTTGATCTTGTTGCTGGACAGAAGGACAAAGTGATAAGACCTTCAATGGTAAAGAGACATTATAAATTGATGAAGGGTGCTGGGGTAGATGTTTCATATAATGAGTTTGAATATGCACATTTGGACTTCACCTTCTCCCACCACGAAGAACTCTTGTCATATGTTATGTCATGCTTGCTGCTTGTGGATCCTAATCCAAAACATCAAGTGAATCAAAGGATTGTAAGGTCAAGGAGGAAAGGACAAGTTGCAGCTAGTGGGTAG 2094 0.4169 MMQRMVDHALGVAKESLKAITYESLNNIVRLINGVSALLLAFLPGKANILEGIHGWELKPTFRGPRFPRWMENGVSSFNQFIHELSLDSDNSSPEYSSGEEDSDRFDYPSSPASQSSRTSEAGFTKYSRHQMDWVQYILLLILFPVKLLLWIPLHLFRLVYYGVSKAMSISGNKHPSHLHAHKRVLSLKDHIIHRATDRRRGVVEDLHLGIELSIEAVFDVVHKAAHLLLSPSEAFGTLFRLFSSHESGTIEDSDGVEDAPVYTATLGENDPTPTERNVKYQPLNTDARTCQDVITDLGYPYEAIRVITADGYILLLERIPRRDSRKAVYLQHGVLDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSRQYWRYSINEHGTEDIPAMIDKIHEVKTAELKLNKPDIEEETDDDQLYNLCAICHSLGGAAMMMYVITRRIEGKPHRLSRLVLLSPAGFHDDSNIVFSMAELLLVILAPVLSLLVPAFYIPTTFFRMLVNKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNTNDMPGVSFRVVLHLAQMKRTGRFRMFDYGSASANMKVYGSPMPLDFGEHYGLINIPVDLVAGQKDKVIRPSMVKRHYKLMKGAGVDVSYNEFEYAHLDFTFSHHEELLSYVMSCLLLVDPNPKHQVNQRIVRSRRKGQVAASG 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03079 697 SUPERFAMILY alpha/beta-Hydrolases 289 664 IPR029058 -
Pumo6g03079 697 PANTHER LYSOSOMAL ACID LIPASE-RELATED 201 667 - -
Pumo6g03079 697 MobiDBLite consensus disorder prediction 89 120 - -
Pumo6g03079 697 Pfam Partial alpha/beta-hydrolase lipase region 292 346 IPR006693 GO:0006629
Pumo6g03079 697 Gene3D alpha/beta hydrolase 280 669 IPR029058 -
Pumo6g03079 697 FunFam Gastric triacylglycerol lipase 280 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03079 Pumo-Chr6 73084489 73090639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03079 2 681 Lipid Metabolism Gene Families AT1G18460 67.690 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03079 - - gmx:100785917 1316.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03079 6 73084489 73090639 Pumo6g03079 6 73084489 73090639 ECH
Pumo6g03079 6 73084489 73090639 Pumo6g03079 6 73084489 73090639 PCT