Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03078 ATGGAAGCTGCATTATGTAGTGCACTTGCTCTTTCACCCAACCAAGTATTCAATGCAGCAAATCCTGGAGATCAAATTTTTCCTTTGAAATATAGCAAAGATCGGAGTGTTGTAATGACAGTGGCAGCCACTGGAATATTAGGGAAAGGTGGTGGGTTGTTGGAGAAGCCAACCATAGAGAAAACATCACCTGGTCGGGAATCTGAATTTGACTTAAGGAAATCACGAAAAACATCCCCACCTTACCGAGTTTTGCTGCACAATGACAACTTCAACAAGCGAGAATATGTTGTGCAAGTGTTGATGAAGGTGATACCTGGAATGACAATTGATAATGCAGTTAACATCATGCAGGAGGCACATTATAATGGACTAGCAGTGGTGATCGTATGTGCTCAAGTGGATGCTGAAGACCACTGCATGCAGTTAAGAGGAAACGGCCTTTTAAGTTCAATTGAACCAGCTGATGGTGGTTGTTGA 480 0.425 MEAALCSALALSPNQVFNAANPGDQIFPLKYSKDRSVVMTVAATGILGKGGGLLEKPTIEKTSPGRESEFDLRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTIDNAVNIMQEAHYNGLAVVIVCAQVDAEDHCMQLRGNGLLSSIEPADGGC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03078 159 SUPERFAMILY ClpS-like 76 153 IPR014719 -
Pumo6g03078 159 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 76 154 - -
Pumo6g03078 159 Gene3D - 76 154 IPR014719 -
Pumo6g03078 159 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 6 159 IPR022935 GO:0006508
Pumo6g03078 159 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 145 IPR003769 GO:0030163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03078 Pumo-Chr6 73076344 73078846 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03078 K06891 - gmx:100785379 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03078 6 73076344 73078846 Pumo6g03078 6 73076344 73078846 ECH