Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03051 ATGGTGCGGTGCAAGCGTGGGAGGCCTTCACCGGAAAATTCTCCGTCCAAACGAAGAAGAAGAAGAAGAAGACGTTCTCCGTTGGAATGTCGTAGGAGATGGGTTTTCTCTTCCAAAGACTCTTCCAATTGCACGGATAAGGTCGTGATTGTTTCATACAATATACTTGGTGTTGAAAATGCATCAAAGCATCCAGATCTGTATTCAAATATTCCACATAGTTTCTTGGAGTGGGACAGGCGGAAAAGGCTCATACTTGAAGAGATTAATAACTATAATGCCAGCATACTGTGTTTCCAGGAGGTTGATCATTTTAATGATCTGGATGATCTTTTCCAGAACAGTGGCTTTAAAGGTGTTTACAAGGCTCGTACAGGAGAAGCACAAGATGGGTGTGCTGTATTTTGGAAAGACAAGTTATTCAATCTTTTGCATCAAGAAGATATAGAGTTTCAAAGATTTGGCATGCGTAACAATGTTGCTCAGCTTTGTGTTTTGGAGGCAAACCATGATAAAAAAGAATCTGACGCATGTAACCTAACAACAATGGCACCATCCACCGGAAAAAGAAGATTTGTAGTAGGAAATATACATGTGTTGTTCAACCCAAATCGTGGTGACATCAAACTGGGCCAGGTCAGACTTTTACTTGATAAAGCTTACAAGTTGTCACAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTAAATAGTGTTCCACAGAGTGCCATATATAAATTTCTGTCTTCATCAAAGTTAGACATCCAATTACATGATCGCAGAAATATGTCAGGACAGCTTGAAATCCAGACTAACACAGTCTTCAGATCACAGATTGGTGAAGACGCTAGCGTGGAGTGTGGAAGACAATTGTACAGATGGAGTGTGGAAGAACTAAGACTTGCATCTGGGGCAGGAGTCACTCATCTTCAGCACCAGCTCAAACTCTGCAGTGCTTATAGTGGTGTTCCTGGAAACCATAGAACGAGAGATGATATTGGGGAGCCCTTGGCAACATCATACCACTCCAAGTTCATGGGAACTGTTGATTATATCTGGCATTCCGAGGATCTTATTCCAGTTAGAGTTCTTGAAACCTTGCCCATTGATATTCTTAGAAGATCTAGAGGACTCCCTAGTGAGAAATGGGGAAGTGACCACCTAGCTGTTGTATGTGAATTGGCTTTTGCGAACAACGGCAATGTATCCTGA 1218 0.4187 MVRCKRGRPSPENSPSKRRRRRRRRSPLECRRRWVFSSKDSSNCTDKVVIVSYNILGVENASKHPDLYSNIPHSFLEWDRRKRLILEEINNYNASILCFQEVDHFNDLDDLFQNSGFKGVYKARTGEAQDGCAVFWKDKLFNLLHQEDIEFQRFGMRNNVAQLCVLEANHDKKESDACNLTTMAPSTGKRRFVVGNIHVLFNPNRGDIKLGQVRLLLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKLDIQLHDRRNMSGQLEIQTNTVFRSQIGEDASVECGRQLYRWSVEELRLASGAGVTHLQHQLKLCSAYSGVPGNHRTRDDIGEPLATSYHSKFMGTVDYIWHSEDLIPVRVLETLPIDILRRSRGLPSEKWGSDHLAVVCELAFANNGNVS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03051 405 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g03051 405 FunFam Carbon catabolite repressor protein 4 homolog 3 22 405 - -
Pumo6g03051 405 Pfam Endonuclease/Exonuclease/phosphatase family 52 389 IPR005135 GO:0003824
Pumo6g03051 405 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 20 398 - -
Pumo6g03051 405 SUPERFAMILY DNase I-like 48 397 IPR036691 -
Pumo6g03051 405 Gene3D Endonuclease/exonuclease/phosphatase 21 404 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03051 Pumo-Chr6 72708894 72715220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03051 78 252 EF-hand Containing Proteins AT5G54130 25.543 9.86e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03051 - - gmx:100777474 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03051 6 72708894 72715220 Pumo6g03051 6 72708894 72715220 ECH