Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03045 ATGCCATGTTCCAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGCCTCTAGTTCCTTCCAGCTTCTCTTCCTCTTCCTCTTCTCCTCTTCAGTTCTTCTTATCAAGTTCATAAACTTCATTGGCAGCTGCACCATATTCCAAAGAGATCATCACTATGAATATGTGTCTTCTGAGTATGATGAAGAAGAAGAAGAAGAAATTCAAGAAAGTTACTCATATATCCATGATTCTATTGAGTCAGATCATCTAGTAGCAGACATCATTTGTGGTGGAGAAACCCTTTTGTTTGTGCACAACAACCAGCCTCAGAGGACTACTCATTCTTCTTCTGAAGAATTCATAAGCCCCCGGGATAGCCTTATTGAAGAAGACTCAGAAGAAAACTATTCCACAGAAACAACTTTGTCTTTTCACAAGTCACCTTTGGTTTCAGACTTTGAAAATGAAGAACAAGAAGAGGCAGAAGAATTTCCAGCAGAAGATGCTGATTCTGTTCCAAATTCTGTCCCAGCTGAAAGCAGGCCCACATCGCCCATCACCCTGAACCTCTACAAAAGTGACATAGTGGACAGTGACAAAAACTATGACGAAGATGATCATGTTGAAATTGGAGTTATTGAAAATAAGAAGGTGCAAGAGGAAAGTCTCACACGAGATGAGAGATTCTTTGTCTATGCTCCTACCCAATTGGAGGCTAAGAAGCTCATTGTGGAGGAAAAGGATGATGAAGAAATATATGGTGACTCATGCACTGTTGGGTCCACCTCTAAGAGCTCCTCTGAATGGAGAAGCTCCATTAATTGCAGAGATTCTGGAACTGAAGACCCTTTTTCTTCCTCGTCAAGAAGAAGTTGCCCCAAGTGGGAATCATACACAGTTTTCCAAAAATATGATGAAGAAATGTCATTCCTAGATAGGATTAGCGCACAGAAACTTCATGAAACTGAGTCTTTAAGGTCTATCAAGGTATCTCCAAGGTCAATTTCAGAGCGTATTGTGTTCAAGTTTTCAAGTATGAATAAAAAACCAGGTGATATGCGTCACAACCCATATCGTGAACTGGAGGCTGCATATGTTGCACAAATATGCTTAACATGGGAAGCCCTTAATTGGAACTACAAGAATTTTCAATCAAAAAGAGCTTCACGAGGCCATGATGTTGATGTGGGTTGTCCAGCCACCATTGCACAGAGATTCCAACAATTTCAAGTGTTGTTGCAAAGATACGTAGAGAATGAGCCTTATGAACATGGTAGGAGACCTGAGATCTATGCTAGAGTGAGGCATTTGGCTCCAAAATTGCTCCTCGTACCAGAATATCGAGAATCAGATGATGATCAGAGGGACGATAATGGCATTCACTCAAAAATATCATCAGCATCATTTCTTATGATAATGGAAGATGGGATCAGAACGTTCATGAGTTTTCTGAAGGCTGATAAAGAGAAACCATGTCAGATTCTGGCAGCTTACTTTAGGAGAAACCGAAAACTCTTGGTTGATCCAACACTCCTCCGCCTTATCAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTGAAAGATCTTCGGCGTTCCCGCAAATGCTTGAGGAAGATAAAGTTGAAGGGAGAAGAAGAGATGGAGATTTGGATGGCACTCATAGACCTCAAAGTGGTGTCAAGGGTTTTGAGAATGAGTGAGTTAAGCGAGGAACAGTTGCATTGGTGTGAAGAGAAGATGAGCAAAGTGAGGGTAATGGATGGAAAATTACAAAGAGATTCCACTCCACTTTTTTTCCCTGCACATTGA 1791 0.407 MPCSKEEALVRLFYNASSSFQLLFLFLFSSSVLLIKFINFIGSCTIFQRDHHYEYVSSEYDEEEEEEIQESYSYIHDSIESDHLVADIICGGETLLFVHNNQPQRTTHSSSEEFISPRDSLIEEDSEENYSTETTLSFHKSPLVSDFENEEQEEAEEFPAEDADSVPNSVPAESRPTSPITLNLYKSDIVDSDKNYDEDDHVEIGVIENKKVQEESLTRDERFFVYAPTQLEAKKLIVEEKDDEEIYGDSCTVGSTSKSSSEWRSSINCRDSGTEDPFSSSSRRSCPKWESYTVFQKYDEEMSFLDRISAQKLHETESLRSIKVSPRSISERIVFKFSSMNKKPGDMRHNPYRELEAAYVAQICLTWEALNWNYKNFQSKRASRGHDVDVGCPATIAQRFQQFQVLLQRYVENEPYEHGRRPEIYARVRHLAPKLLLVPEYRESDDDQRDDNGIHSKISSASFLMIMEDGIRTFMSFLKADKEKPCQILAAYFRRNRKLLVDPTLLRLIKKVNQKKKMKVKDLRRSRKCLRKIKLKGEEEMEIWMALIDLKVVSRVLRMSELSEEQLHWCEEKMSKVRVMDGKLQRDSTPLFFPAH 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03045 596 PANTHER DNA LIGASE (DUF1666)-RELATED 12 596 - -
Pumo6g03045 596 MobiDBLite consensus disorder prediction 143 179 - -
Pumo6g03045 596 MobiDBLite consensus disorder prediction 251 285 - -
Pumo6g03045 596 Pfam Protein of unknown function (DUF1666) 354 594 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03045 Pumo-Chr6 72595987 72600832 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03045 - - gmx:100786564 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03045 6 72595987 72600832 Pumo6g03045 6 72595987 72600832 ECH
Pumo6g03045 6 72595987 72600832 Pumo6g03045 6 72595987 72600832 PCT