Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03041 ATGCTTTATGTCAAGGATCACAATGCGTTACTACCCCCATCAAGCATAGGTGAATGTGTTGTAGAATATCAAAGGTTGCCTCCAAACCAAACGGCTGACAAGTGGATACCTCTCCAAGGGGTGAAAAGGGGTGAAATTCACATCCAAATTACCAGAAAAGTTCCAGAGATGCAGAAGAGGCAAAGTCTAGACTCTGAACCTTCCTTGAGTAAACTACACCAAATTCCTAACCAGATAAAACAGATGATGATCAAGTTCAGGTCCTTCATAGAGGATGGAAATCTTGAAGGACTCTCCACAACATTGAGTGAGCTAGAAACTCTAGAGGATACACAGGAAGGGTATATAGTCCAGCTGGAGACTGAGCAAATGCTTCTTCTCAGCAAAATAAAGGAACTTGGCCAAGAGATCATTAATTCTTCTCCTTCCCTTAGCAGGAGATCTTCTTCAACTGGAAACTGA 462 0.4221 MLYVKDHNALLPPSSIGECVVEYQRLPPNQTADKWIPLQGVKRGEIHIQITRKVPEMQKRQSLDSEPSLSKLHQIPNQIKQMMIKFRSFIEDGNLEGLSTTLSELETLEDTQEGYIVQLETEQMLLLSKIKELGQEIINSSPSLSRRSSSTGN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03041 153 Gene3D C2 domain 1 53 IPR035892 -
Pumo6g03041 153 PANTHER OS01G0128800 PROTEIN 2 149 - -
Pumo6g03041 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 51 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03041 Pumo-Chr6 72565362 72566015 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03041 - - gmx:100789237 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03041 6 72565362 72566015 Pumo6g03041 6 72565362 72566015 ECH
Pumo6g03041 6 72565362 72566015 Pumo6g03041 6 72565362 72566015 PCT