Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03003 ATGAAGGCAGCACACATTGCTTTGTTCACTTTGGTGGTGCTTCTTGCAGCTGAAGTGCAAGTGTCAATGGCAGTAACATGCAGCCCAGTACAGCTGAGCGCATGTGTGAGTGCAATAACCTCTTCAACCCCTCCATCAAACCTATGCTGCTCCAAGATCAAGGAACAGAAACCATGCCTCTGCCAATACCTCAAGAACCCCAATCTCAAGAAGTTTGTTGACTCTCCCAATGCAAGGAGAGTTGCTAGCACTTGTGGACTCCCTTCCCAAGGTGCTAAGTGTTGTTAA 288 0.4792 MKAAHIALFTLVVLLAAEVQVSMAVTCSPVQLSACVSAITSSTPPSNLCCSKIKEQKPCLCQYLKNPNLKKFVDSPNARRVASTCGLPSQGAKCC 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03003 95 SMART aai_6 27 94 IPR016140 -
Pumo6g03003 95 Gene3D - 25 95 IPR036312 -
Pumo6g03003 95 CDD nsLTP2 27 88 IPR033872 GO:0006869
Pumo6g03003 95 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 88 IPR036312 -
Pumo6g03003 95 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 5 89 IPR033872 GO:0006869
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03003 Pumo-Chr6 71852167 71852853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03003 1 88 Acyl Lipid Metabolism Gene Families AT3G18280 56.180 1.67e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03003 - - gmx:113002176 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03003 6 71852167 71852853 Pumo6g03003 6 71852167 71852853 ECH