Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02948 ATGAGAAGGGTACCCTCCATTCTCTTCAGAACCCTCGCCGCCCCTCGCGCCACCTCCTTCGCCATCCCCAACCGCCTTCTCCACGCCGCGCTCTACGGCAGCGCCACCGCCGGTGCCCACTCTCGCCGCCGCCGCCGCTTCTCCTCGCTCCTCGCTCCATTCGCCGCCGCGTCTCTCGGCGTCGCCGGCGCTCTGATCTCTCAGGAAGTCCTCGCCAAGGAGCCCCCGCCGCCAGAGGCTCTCCCACACGACGTCGTTCTTTACCAGTTCGAGGCTTGCCCTTTCTGCAACAAAGTCAAAGCATTTTTGGACTACCATGATATACCATACAAAGTTGTGGAGGTTAACCCTCTCAGTAAGAAAGAAATCAAATGGTCTGAGTATCAGAAGGTGCCAATATTGATGGTAGATGGCGAGCAGCTAAATGATTCATCAGTTATAATTGACAAGCTGGGACATAAGATTCTGTCAAAGAAAATTCCAGATTCAACTTCTGAGGATGAAGAGACAAAATGGCGGCGGTGGGTTGATAATCATTTGGTGCATGTTCTGTCACCGAACATATATCGAAATACATCTGAAGCACTTGAATCATTTGAGTATATTACGAGCAATGGCAATTTCAGCTATCTTGAAAAAATTTCGGTGAAGTATGCTGGAGCTGCAGCTATGTATTTTGTGTCTAAGAATCTGAAGAAGAAATATAACATTACTGATGAACGTGCTGCTCTTTATGAGGCAGCAGAAACATGGGTAGATGCTCTGAATGGCCGGGCAGTTCCTTGGAGGGTCTAA 795 0.4981 MRRVPSILFRTLAAPRATSFAIPNRLLHAALYGSATAGAHSRRRRRFSSLLAPFAAASLGVAGALISQEVLAKEPPPPEALPHDVVLYQFEACPFCNKVKAFLDYHDIPYKVVEVNPLSKKEIKWSEYQKVPILMVDGEQLNDSSVIIDKLGHKILSKKIPDSTSEDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFEYITSNGNFSYLEKISVKYAGAAAMYFVSKNLKKKYNITDERAALYEAAETWVDALNGRAVPWRV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02948 264 SFLD Prostaglandin E synthase like 64 258 - -
Pumo6g02948 264 SUPERFAMILY Thioredoxin-like 84 156 IPR036249 -
Pumo6g02948 264 ProSitePatterns Glutaredoxin active site. 87 103 IPR011767 -
Pumo6g02948 264 Gene3D Glutaredoxin 79 158 - -
Pumo6g02948 264 SUPERFAMILY GST C-terminal domain-like 160 257 IPR036282 -
Pumo6g02948 264 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 8 258 - -
Pumo6g02948 264 Pfam Glutathione S-transferase, N-terminal domain 87 153 IPR004045 -
Pumo6g02948 264 CDD GST_C_mPGES2 165 258 IPR034335 -
Pumo6g02948 264 ProSiteProfiles Glutaredoxin domain profile. 73 167 - -
Pumo6g02948 264 Gene3D - 162 260 - -
Pumo6g02948 264 SFLD Prostaglandin E synthase like.1 64 258 IPR034334 GO:0050220
Pumo6g02948 264 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 83 159 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02948 Pumo-Chr6 69908769 69913566 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02948 K05309 - gmx:100811576 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02948 6 69908769 69913566 Pumo6g02948 6 69908769 69913566 ECH