Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02945 ATGATCTCCTTAATAGACTTCTACCATGTCATGACTGCAATGGTGCCACTCTATGTGGCTATGATACTAGCCTATGGCTCAGTGAAGTGGTGGAAGATTTTCTCCCCTGACCAGTGTTCTGGCATCAACCGTTTTGTGGCACTCTTTGCAGTGCCTCTTCTTTCCTTCCACTTCATAGCCTCCAACAACCCTTATGAAATGAACCTCCGGTTCTTAGCTGCTGACACACTTCAGAAGATCATAATACTTGCCCTTCTTGCAGTCTGGAGCAACATCACCAAAAGGGGTTGCTTGGAATGGGCCATAACCTTGTTCTCCCTTTCCACCCTCCCAAACACTTTGGTCATGGGCATCCCTTTGCTCAAAGGGATGTATGGTGACTTCTCAGGGAGCCTTATGGTGCAAATTGTGGTCCTTCAGTGCATCATTTGGTACACCTTGATGCTGTTCTTGTTTGAGTTTAGAGGTGCCAGAATGCTAATCTCTGAGCAGTTCCCTGACACTGCTGGCTCCATTGTCTCCATCCATGTTGACTCTGATGTCATGTCATTGGATGGAAGACAACCACTTGAGACTGAAGCTGAGATCAAGGAAGATGGGAAACTCCATGTCACTGTGAGGAAATCCAATGCTTCAAGATCAGACATCTTCTCTAGAAGGTCTCAGGGTCTTTCTTCCACCACTCCACGCCCTTCTAACCTCACCAATGCAGAGATATACTCTTTGCAATCCTCTAGGAACCCCACACCAAGAGGGTCCAGTTTCAACCACACTGATTTCTACTCAATGATGGCTGCTGGTGGCAGGAACTCCAACTTTGGTGCCTCTGATGTTTATGGCCTTTCAGCCTCAAGAGGGCCAACTCCAAGGCCTTCTAACTATGATGAAGATGGTGGGAAGCCAAAGTTCCATTACCATGCTGGTGGAACTGGACACTACCCTGCACCTAACCCTGGCATGTTCTCTCCCTCTAATGGGTCCAAAAGTGTTGCTGCTGCTAATGCTAATGCTAATGCCAAGAGGCCTAATGGGCAGGCTCAGCTGAAGCCTGAGGATGGGAATAGGGACCTTCATATGTTTGTCTGGAGTTCAAGTAATTCACCAGTTTCTGATGTGTTTGGTGGCCATGAATATGGAGGTCATGATCAGAAAGAAGTCAAATTGACTGTATCTCCAGGAAAAGTGGAGAATCATAGAGACACTCAAGAGGACTACCTAGAGAAAGATGAGTTCAGCTTTGGGAATAGAGGAATGGATAGGGAGATGAATCAGCATGAGGGTGAGAAAATTGGAGATGGGAAGCCAAAAACCATGCCTCCAGCAAGTGTGATGACAAGGCTTATATTGATTATGGTGTGGAGAAAACTCATCAGAAACCCCAACACCTACTCTAGCCTAATTGGCCTCACTTGGTCTCTTGTTTCATTCAAGTGGAATGTTGAGATGCCTGCCATAATAGCAAAGTCTATCTCCATATTGTCAGATGCAGGACTTGGCATGGCCATGTTCAGTCTTGGTCTCTTCATGGCTTTGCAGCCGAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCCTACACGTTGCCATTGTTCAGGTGTGTCTCTCTCTTCTGCTCCCTTCTCACAAAGCCAGTACAGTACAACATTCATTGCATAACCTCCAAAAACTACTTTATTTTAAATTTACAACATTTATATCCACCTGTGCCCAGGGCCCAAGATATGCTATTTTATTGCCATCTAAATAA 1827 0.4592 MISLIDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYEMNLRFLAADTLQKIIILALLAVWSNITKRGCLEWAITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEFRGARMLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDGGKPKFHYHAGGTGHYPAPNPGMFSPSNGSKSVAAANANANAKRPNGQAQLKPEDGNRDLHMFVWSSSNSPVSDVFGGHEYGGHDQKEVKLTVSPGKVENHRDTQEDYLEKDEFSFGNRGMDREMNQHEGEKIGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQVCLSLLLPSHKASTVQHSLHNLQKLLYFKFTTFISTCAQGPRYAILLPSK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02945 608 MobiDBLite consensus disorder prediction 324 351 - -
Pumo6g02945 608 MobiDBLite consensus disorder prediction 324 343 - -
Pumo6g02945 608 Pfam Membrane transport protein 9 561 IPR004776 GO:0016020|GO:0055085
Pumo6g02945 608 NCBIfam auxin efflux carrier 1 561 IPR014024 -
Pumo6g02945 608 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 561 - -
Pumo6g02945 608 MobiDBLite consensus disorder prediction 213 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02945 Pumo-Chr6 69866164 69870600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02945 1 561 Organic Solute Cotransporters AT1G73590 72.681 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02945 K13947 - gmx:100499637 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02945 6 69866164 69870600 Pumo6g02945 6 69866164 69870600 ECH
Pumo6g02945 6 69866164 69870600 Pumo6g02945 6 69866164 69870600 PCT