Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02943 ATGGCTTCCTTGGCAATGGTGCAAGATGAACGTTGCGTTCAGAGAAGCTACTGGATTGAACATAGCACGGATTTGTCGGTAGAGTCAATGATGCTCGATTCCAACGCCTCTGATCTCGACAAGGAAGAGAGACCCGAAGTTTTGTCCATACTACCAGCATATGAAGGAAAATCAGTTGTAGAACTTGGAGCAGGAATTGGAAGATTCACAGGTGAATTGGCTAAGAAAGCTGGCCAGTTGCTTGCAGTGGATTTCATTGAGAGTGCTATAAAGAAGAATGAAAGCATTAATGGGCACCACAAGAATGTCAAGTTCATGTGTGCTGATGTCACATCTCCACACTTGCATATTTCTGAAGGATCAATTGATCTGATATTCTCAAATTGGTTACTTATGTATCTTTCAGATAAAGAGGTTGAGAATTTAGCTGCAAGGATGATCAAATGGTTAAAAGTAGGTGGATATGTATTCTTCAGAGAATCATGTTTCCACCAATCTGGAGATTCCAAGAGAAAATACAACCCTACTCACTATAGGGAACCTAGATTTTACACTAAGGTATTTAAAGAGTGCCATATGAGTGATGATACCGGGGATTCCTTTGAACTTTCCCTTGTTGGCTGTAAATGCATTGGAGCTTATGTCCGAAATAAGAAGAATCAAAACCAGATTTGCTGGATATGGCAAAAAGTTAGATCACAGGATGATAGGGGGTTCCAGCGGTTCTTAGATAGTGTTGAGTATAATCATAAGGATATTTTACTTTATGAGAGTGTTTTTGGCCAAGGCTTTGTGAGCACAGGAGGACTTGAAACAACCAAGGAATTTGTGGCAAAGTTGGGACTAAAACCTGGCCAGAAAGTACTGGATGTTGGTTGTGGTACTGGGGGAGGTGACATTTACATGGCTGAAAACTTTGATGTTGAGGTAGTTGGCATTGACCTCTCCATAAACATGATTTCTCTTTCTATTGAACGTGCTATTGGACTCAAATGCTCAGTAGAATTTGAGTGTGCTGATTGCACTAAAAAAACATACCCTGAGAATACATTTGATGTAATCTATTCCCGTGACACATTGTTACACATCAAAGATAAACCATCACTATTCAGATCATTTTACAAGTGGTTGAAGCGTGGAGGTACACTTCTGATTACTGATTACTGCAAAAGTGAAGGAAGTCTATCATTAGGATATGCTGAGTACATAAAAAAAGGAGGATATTATATCCATGACATGAAAACTTATTGTCAGATGCTCGAGACTGCTGGATTTGATGATGTTGTTGCCGAGGATCGAACTAATTTGTTCATGAAAACACTACAACAGGAGTTGAATGCCCTTGAGAGCAAGAAGCATGATTTCATTGATGACTTCTCGGAGGAAGACTACAATGAAATTACTGAAAGATGGAAGGCCAAGCAGATGAGGGGTGCAGATGGTGAACAAATATGGGGCTTGTTCATTGCCAATAAAAAATAA 1482 0.3968 MASLAMVQDERCVQRSYWIEHSTDLSVESMMLDSNASDLDKEERPEVLSILPAYEGKSVVELGAGIGRFTGELAKKAGQLLAVDFIESAIKKNESINGHHKNVKFMCADVTSPHLHISEGSIDLIFSNWLLMYLSDKEVENLAARMIKWLKVGGYVFFRESCFHQSGDSKRKYNPTHYREPRFYTKVFKECHMSDDTGDSFELSLVGCKCIGAYVRNKKNQNQICWIWQKVRSQDDRGFQRFLDSVEYNHKDILLYESVFGQGFVSTGGLETTKEFVAKLGLKPGQKVLDVGCGTGGGDIYMAENFDVEVVGIDLSINMISLSIERAIGLKCSVEFECADCTKKTYPENTFDVIYSRDTLLHIKDKPSLFRSFYKWLKRGGTLLITDYCKSEGSLSLGYAEYIKKGGYYIHDMKTYCQMLETAGFDDVVAEDRTNLFMKTLQQELNALESKKHDFIDDFSEEDYNEITERWKAKQMRGADGEQIWGLFIANKK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02943 493 Gene3D Vaccinia Virus protein VP39 12 242 IPR029063 -
Pumo6g02943 493 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 255 492 IPR029063 -
Pumo6g02943 493 Pfam Methyltransferase domain 61 158 IPR013216 GO:0008168
Pumo6g02943 493 PANTHER PHOSPHOETHANOLAMINE METHYLTRANSFERASE 6 490 - -
Pumo6g02943 493 ProSiteProfiles Phosphoethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.103) family profile. 1 493 IPR025771 GO:0000234|GO:0006656
Pumo6g02943 493 Pfam Methyltransferase domain 275 428 - -
Pumo6g02943 493 Coils Coil 438 458 - -
Pumo6g02943 493 CDD AdoMet_MTases 59 158 - -
Pumo6g02943 493 CDD AdoMet_MTases 287 388 - -
Pumo6g02943 493 Gene3D Vaccinia Virus protein VP39 243 493 IPR029063 -
Pumo6g02943 493 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 209 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02943 Pumo-Chr6 69820704 69826975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02943 5 492 Acyl Lipid Metabolism Gene Families AT3G18000 73.156 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02943 K05929 - gmx:100818466 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02943 6 69820704 69826975 Pumo6g02943 6 69820704 69826975 ECH