Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02941 ATGCCAGTGAAGGGTACCCCTTTTGATTTTACATCTGAGAATAGAATAGGCAACACCATTAGTCAGGTTGGACTGGGATATGACCACAATTATGTGCTTGATTGCGGGGAAGAGAAAGCGGGTTTGAGACACGCTGCAAAAGTGAGGGATTCATCAAGTTCAAGAGTGCTTAACTTGTGGACAAATGCCCCTGGTGTGCAATTTTACACTGCAAACTATGTTAATGGTGTTCAAGGAAAAGGAGGTGCTATATATGGAAAGCATGCTGGTTTATGTCTGGAGACACAAGGATTCCCTAATGCCATAAACCAACCAAATTTTCCATCTGTTGTGGTTCGTCCGGGTGAGAAGTATCAACATACCATGTTGTTTGAGTTTTCACTTGAGTGA 390 0.4256 MPVKGTPFDFTSENRIGNTISQVGLGYDHNYVLDCGEEKAGLRHAAKVRDSSSSRVLNLWTNAPGVQFYTANYVNGVQGKGGAIYGKHAGLCLETQGFPNAINQPNFPSVVVRPGEKYQHTMLFEFSLE 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02941 129 Pfam Aldose 1-epimerase 2 124 IPR008183 GO:0005975|GO:0016853
Pumo6g02941 129 Gene3D - 1 128 IPR014718 GO:0030246
Pumo6g02941 129 PANTHER ALDOSE-1-EPIMERASE 1 128 - -
Pumo6g02941 129 SUPERFAMILY Galactose mutarotase-like 2 127 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02941 Pumo-Chr6 69809001 69809390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02941 3 127 Miscellaneous Gene Families AT3G47800 52.000 2.85e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02941 K01785 - gmx:100776238 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02941 6 69809001 69809390 Pumo6g02941 6 69809001 69809390 ECH