Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02728 ATGCCCCAAAACGACACCCACTCCCACCACCAAAACGGTGAAACCACCGTCACCACCTCCTCCCACCCTGTTCTAACCCTCCACCTCCGCGACCCCCTCCTCATCCCACCACCACCACCACCAGCAATGACCTCCACCACCTCCACCTCCACCGACCCCCTCCCCTCCTCCGACACCGCCGACGCCTCCGCCGCCGCCGCCGTCCGCGCCGTCAACAAGCGCTTCGAGGGCCTCCTTACCGTCCGCACCAAGGCCATCAAGGGCAAAGGCGCCTGGTACTGGGCCCACCTCGAGCCCATCCTCGTCCCCCACCCCGACACCGGCCTCCCCAAATCCGTCAAGCTCAAATGCTCCCTCTGCGACTCCCTCTTCTCCGCCTCCAACCCCTCAAGAACCGCTTCGGAACACTTAAAGCGCGGAACTTGCTCCAACTTCAGCTCCGGTCTAAGACCCGGTTCACTCCCTTCCCCTCTCCCCATTTCTTCCATCACCCCCGGTTCGAACCGGAAAAGGGGTTCTCCCCAAATGGGCGCCACGTCACCCCCTTCGTATCAAAATCACTCCTTGGCAATGGTCGAGTCTTCCCGCTTCGAAATCGGATACACCCATGTGCAGAATAATAATAACAACAACACTCTGCACCCGCACCAGCAGCAGCATTTAATGTTGTCTGGTGGGAAAGATGATTTGTGTGCTCTGGCAATGTTTGAGGACAGTGTCAAGAAGCTGAAGAGTCCAAAGACTTCGCCTGGTCCTGCCTTGAGCAAGGACCAGGTGAATTCTGCTCTGGACTTGCTCTTCGACTGGTTCTATGAAACGTGTGGCTCTGTGTCTTTGTCCACTTTAGAACACCGAAAGTTTCAGGCTTTTTTGAGCCAGGTTGGTTTGCCCAACAATTTGAGGAGGGAGATTTCTGGGGGTAGGCTTGATGCTAGGTTCGGGGAGGCCAAGGCTGAGTCCGAGGCTAGGATAAGGGATGCCATGTTTTTTCAGTTGGCCAGTGATGGGTGGAAGGGTGGGGATTGGTTTAACTTTAACTTGTGCTGTGGTGGAGGGGAGAGTTTGGTCAAGTTTGTGGTGAATCTCCCCAATGGGAGTAGTGTGTTTCAGAAGGCCGTGTTTACTGGGGGAGTGGAGAATTCTAAGTATGCTGAGGAGGTTTTGTGGGAGACGGTTACTGCGGTTACCGGGAGTGTGGCGCAGAGGTGTGTGGGGATTGTGGCGGATAAGTTTAAGGCGAAGGCGTTGAGGAACTTGGAGGTGCAGCACCATTGGATGGTCAACACTTCCTGCCAGCTTCAGGGGTTGGCTAGCTTGATCAAGGACTTTAACTGCGAGCTGCCGCTTTTCAGGGTTGTGATTGAGAATTGTTTGAAGGTTGCTAATTTTATAGACAATGAGTCACAGGTGAGGAGTGTGTTTCTCAAGTGCAGGGTTCAGGAGATGGACTGTGGCGGGGTGATTCGCGTGCCTTCGCCGAAATGTGATCCGTTGAAGAACTTTGGAGTGGTGTTTCCTATGTTGGAGGACATTTTGAGCTGTGCTAGGGTGATACAGATGGTGGTGATGGAGGATGGGTTTAAGGTGATGTGTATGGAGGATCCGTTGGCGAGGGAGGTTGCGGGGATGGTGCAGAATGAGGGGTTTTGGAATGAGTTGGAGGCGGTTTATTCGCTTGTGAAGCTTGTTAGGGGAATGGTGCAGGATGTTGAGGCGGAGAGGCCGTTGATTGGTCGGTGCTTGCCTCTTTGGGAGGAGCTGAGGAGCAAGGTGAAAGAGTGGTGTGGGAAGTACAACATTGTGGAAGGACCTGTGGAGAAGATAGTTGAGAAGCGGTTTAGGAAGAATTATCACCCTGCGTGGGCGGCAGCATTTATACTCGATCCACTTTACTTGATTAAGGACGCGAGTGGGAAGTATCTTCCTCCGTATAAGTGTTTGACACGCGATCAGGAGAAGGATGTAGATAAGTTACTGACGAGGCTGGCTTCGCGAGAAGAGGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGGTCAGAGGGGCTTGATCCGCTTTATGCACAGGCTGTTCAGATGAAGCAAAGGGATCCGGTAACCGGGAAGATGAAGGTTGCAAATCCGTTGAGTAGTAGACTTGTCTGGGAAACTTGTTTGAGTGAGTTTAAATCACTAGGGAAGATTGCAGTGAGGCTCATTTTTCTGCATGCAACTTCATGTGGGTTTAAGAGTAATTGGTCTTTTATGAGGAAATTTTCAGCTAATAAACACTCAAGAGTTGCCTTGGAAAGGGCTCAGAAAATGATATATATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCTAGTGAGGAAGAAAAGGATGCAGAGCTGTTTGCCACGTCTGGTAGTGAGGATGGCATGCTGGCTGAGGTCTATGCTGATGCTCCCTTAGTGTAA 2442 0.5205 MPQNDTHSHHQNGETTVTTSSHPVLTLHLRDPLLIPPPPPPAMTSTTSTSTDPLPSSDTADASAAAAVRAVNKRFEGLLTVRTKAIKGKGAWYWAHLEPILVPHPDTGLPKSVKLKCSLCDSLFSASNPSRTASEHLKRGTCSNFSSGLRPGSLPSPLPISSITPGSNRKRGSPQMGATSPPSYQNHSLAMVESSRFEIGYTHVQNNNNNNTLHPHQQQHLMLSGGKDDLCALAMFEDSVKKLKSPKTSPGPALSKDQVNSALDLLFDWFYETCGSVSLSTLEHRKFQAFLSQVGLPNNLRREISGGRLDARFGEAKAESEARIRDAMFFQLASDGWKGGDWFNFNLCCGGGESLVKFVVNLPNGSSVFQKAVFTGGVENSKYAEEVLWETVTAVTGSVAQRCVGIVADKFKAKALRNLEVQHHWMVNTSCQLQGLASLIKDFNCELPLFRVVIENCLKVANFIDNESQVRSVFLKCRVQEMDCGGVIRVPSPKCDPLKNFGVVFPMLEDILSCARVIQMVVMEDGFKVMCMEDPLAREVAGMVQNEGFWNELEAVYSLVKLVRGMVQDVEAERPLIGRCLPLWEELRSKVKEWCGKYNIVEGPVEKIVEKRFRKNYHPAWAAAFILDPLYLIKDASGKYLPPYKCLTRDQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKFSANKHSRVALERAQKMIYIAAHAKLERRDFSSEEEKDAELFATSGSEDGMLAEVYADAPLV 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02728 813 MobiDBLite consensus disorder prediction 1 61 - -
Pumo6g02728 813 MobiDBLite consensus disorder prediction 128 185 - -
Pumo6g02728 813 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g02728 813 PANTHER OSJNBA0013A04.12 PROTEIN 71 779 - -
Pumo6g02728 813 SUPERFAMILY Ribonuclease H-like 397 778 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02728 Pumo-Chr6 65564962 65568058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02728 - - gmx:100814598 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02728 6 65564962 65568058 Pumo6g02728 6 65564962 65568058 ECH