Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02721 ATGAAAGCTTCTACTCTACCCATTTACCCAACCCCTCTCCCCAAAACCTCTTTCTCCGCTTCAAATTTCTCTTTTCATCTCCTTCCAATGGCTTCCATTCCCACACTCTCTTCACCCCTACCCACTCTCTCCCCTCACTCTTCATCCCATTCGAACCCCAACCACTGCACTCTCCCTCTCACCTCTCTCTTCGGCACCAGAATCACCCTCCAACGCGCCACGTCATCATCCCGCTCCCTCCCCAACACGAATTGCCGTGCGACATCAGCCACCGTGTCGTTTAGCCTCCCCACCCCGAAACCCCTTTCGGATACGCCCGAGAAAACCCCAAAGTGGTCGGCGAGGGCTATAAAGTCTTATGCAATGGCGGAATTGGAAGCCAGGAAGCTCAAGTATCCCTACACGGGAACCGAGGCGCTTCTCATGGGGATTTTGGTAGAAGGAACAAGTAAAGCTGCAAAATTCTTAAGAGCTAATGGAATTACTCTTTTCAAAGTACGTGAAGAAATAGTAGAGCTACTTGGGAAATCTGACTTGTATTACTTCAGCCCTGAGCATCCTCCTTTGACTGAACCAGCCCAGAAAGCCCTTGATTGGGCAATTGAAGAGAAATTGAAGTCAGGTGAAGGAGGAGAAATAAACGTTACACATTTACTTCTAGGAATTTGGTCACAAAAAGAATCAGCAGGTCAACAGATCTTGTCTACTTTAGGTTTCAATGATGAAAAAGCCAAAGAACTTGCTAAATCAATTGATGGAGATGTTGATTTGAGTTTCAAAAGGCAAGCTTAA 792 0.4672 MKASTLPIYPTPLPKTSFSASNFSFHLLPMASIPTLSSPLPTLSPHSSSHSNPNHCTLPLTSLFGTRITLQRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYAMAELEARKLKYPYTGTEALLMGILVEGTSKAAKFLRANGITLFKVREEIVELLGKSDLYYFSPEHPPLTEPAQKALDWAIEEKLKSGEGGEINVTHLLLGIWSQKESAGQQILSTLGFNDEKAKELAKSIDGDVDLSFKRQA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02721 263 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 33 259 IPR044217 -
Pumo6g02721 263 ProSiteProfiles Clp repeat (R) domain profile. 106 254 IPR004176 -
Pumo6g02721 263 SUPERFAMILY Double Clp-N motif 111 253 IPR036628 -
Pumo6g02721 263 Gene3D - 111 257 IPR036628 -
Pumo6g02721 263 Pfam Clp amino terminal domain, pathogenicity island component 212 250 IPR004176 -
Pumo6g02721 263 Pfam Clp amino terminal domain, pathogenicity island component 123 175 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02721 Pumo-Chr6 65199412 65203708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02721 - - gmx:100802336 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02721 6 65199412 65203708 Pumo6g02721 6 65199412 65203708 ECH