Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02717 ATGACCCATACCCGAAAGCCCAGCAAGGCCAACCCCCAAGCCCAACAAAACCCTTCCTCTTCTTCTTCGTTCTCCACCACCGGCATGAAACTCATCGTCCCCCTCCAGGGCGTCGTGCAGGGCCGCGGAGGCCTTCTCCTCGGGACTCTCGTCCCCTGCGCGTTGTTCTACTTCCTCCAGCTCTACCTCAAACGACGCCGTTCCAACTTCGCCCCTCCCTCCCCCTCCTCTGCATCCGAATCCACGCTCCCCCGCACCTCCTCGCGCTCCAATCTGTCGACACGTGGCTCCATTTCCCGCGTCCGCGTCTCGCGTCTCGCCACGCAGATTGCCAGGCCCGACGAGTCGCTCTATTACGTCGGCCTGGAGAGGGTTTCGCAAGATCCCTACGACGCGTTGGAGAATCCCAATGGGATTATTCAGTTGGGCTTGTCGGATAACAAGCTGTGCTTGGATTTGATAGGGGAATGGGTGGCGCGGAACTTGGAGGGGTCCATGAGTGGTGGCGTTGGATTGGGAATCAACGGGATTGTGCCGTATCAGGCGTTTGATGGGGTCATGGAATTGAAAATGGCTTTGTCAGATTTTATGCATCAGGTGATGGGAGGATCGGTGAAATTTGACCCATCTAACATGGTACTAACAGCTGGGGCAACTCCTGCAATTGAGATATTGTCCTTCTGTTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCATATTATCCAGGCTTTGACAGAGATGTAAGATGGCGTCCAGGGGTAGACCTAATACCTGTTCACTGTCGCAGTACTGACGATTTCAATTTAAATATCACTGCTCTTGAACAAGCATTTAGTCAAGCAAGAAAACGAGGAGTCAAAGTTCGTGGAATTCTAATTTCCAATCCTTCAAATCCTGTTGGCAATATGATGACAATAGACATGCTTTACAGTATTCTAGACTTTGCTGAAGAGAAAAATATTCATATCATTGCTGATGAAGTATTTGCAGGCTCCACATATGGAAGTGAGAAGTTTGTGAGCGTAGCTGAAATTCTTGATTCAGATTATATAGACAAGAGCCGGGTTCATATAATATATGGTCTGTCAAAAGACCTCTCACTTGCTGGCTTTAGAGTTGGGGTTATATGTTCATATAATGAGAGTGTTTTGGCTGCTGCCAAGAAGTTGAGTAGATTTTCCTCTATATCTGCTCCGACCCAGAGGTTAGTTACTTCAATGCTTTCAGATAAAAGATTTATTCGGGAGTACTTTGAAACCAACCGGAAAAGAATACAACAAGTGCACGATGAATTTGTGGGTTGTCTAAGTAAACTAGGAATCAAGTGTGCCAAGAGCAGTGCTGGTATGTACTGTTGGGCTGATATGAGTGGATTAATCCGACCTTATAGTGAGAAAGGAGAAATTGAATTATGGGAGAAGTTTTTGAGTGTGGCTAAGATCAATATAACTCCTGGGTCAGCCTGCCATTGCATAGAACCAGGATGGTTTCGAATTTGTTTTACCACTATAACATTAGAGGAGATCCCTCTGGTTATTGAACGAATTAGGAGAGTTGTTGAAAGTTGTAATTCTTCTAGTTGA 1590 0.4673 MTHTRKPSKANPQAQQNPSSSSSFSTTGMKLIVPLQGVVQGRGGLLLGTLVPCALFYFLQLYLKRRRSNFAPPSPSSASESTLPRTSSRSNLSTRGSISRVRVSRLATQIARPDESLYYVGLERVSQDPYDALENPNGIIQLGLSDNKLCLDLIGEWVARNLEGSMSGGVGLGINGIVPYQAFDGVMELKMALSDFMHQVMGGSVKFDPSNMVLTAGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVRWRPGVDLIPVHCRSTDDFNLNITALEQAFSQARKRGVKVRGILISNPSNPVGNMMTIDMLYSILDFAEEKNIHIIADEVFAGSTYGSEKFVSVAEILDSDYIDKSRVHIIYGLSKDLSLAGFRVGVICSYNESVLAAAKKLSRFSSISAPTQRLVTSMLSDKRFIREYFETNRKRIQQVHDEFVGCLSKLGIKCAKSSAGMYCWADMSGLIRPYSEKGEIELWEKFLSVAKINITPGSACHCIEPGWFRICFTTITLEEIPLVIERIRRVVESCNSSS 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02717 529 MobiDBLite consensus disorder prediction 1 26 - -
Pumo6g02717 529 SUPERFAMILY PLP-dependent transferases 115 523 IPR015424 -
Pumo6g02717 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 323 346 - -
Pumo6g02717 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 357 381 - -
Pumo6g02717 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 142 168 - -
Pumo6g02717 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 254 - -
Pumo6g02717 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 287 311 - -
Pumo6g02717 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 389 412 - -
Pumo6g02717 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 174 190 - -
Pumo6g02717 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 211 231 - -
Pumo6g02717 529 CDD AAT_like 180 520 - -
Pumo6g02717 529 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 363 376 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pumo6g02717 529 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 103 523 - -
Pumo6g02717 529 Pfam Aminotransferase class I and II 141 518 IPR004839 GO:0009058|GO:0030170
Pumo6g02717 529 Gene3D Aspartate Aminotransferase, domain 1 128 517 IPR015422 GO:0003824
Pumo6g02717 529 MobiDBLite consensus disorder prediction 70 96 - -
Pumo6g02717 529 Gene3D - 162 412 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02717 Pumo-Chr6 65133998 65138025 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02717 K14270 - gmx:100811906 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02717 6 65133998 65138025 Pumo6g02717 6 65133998 65138025 ECH