Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02619 ATGCGAGTCTTCGCTTCTCGAACCTCCAATCTCTTCAAGCTCGATCATTTCCCACTGATTCACAACCCTAATCTCAATCCCTTCAGGGAATTCTCGCAATCCACCACAATCCCCAAAAAGCAACTCAGGGTTCGCGACCACGGCTACGACAACTACATGGAAGTCGAGAAGAAAACCCGCAAGGTCCTCAAATTCCAGAGCCTCATCCTCTCCGAGCCCTCCCAATCGCTTCCAATCTCGCGCCTCGAGACCCTCGGGCGGCGCTTCGGCTTCACGCGCCACGAGGCCGGCGCGTTCGTCCTCAAGTTCCCGCACGTGTTCGAAATCTTCGAGCACCCCGTGCAGCGCATCCTCTTCTGCCGCCTCACCCGCAGGGCCATCCTCCAGATCGAGCAGGAGCGCCACGCGCTCGCCGCGGAGCTCCCACGCGCCGTCACGCGCCTCCGGAAGCTCCTCATGATGTCGAACGACGGCCGCCTCCGCCTCGAGCACGTGCGCATCGCACGCGCCGCGTATGGGCTCCCGGACGATTTTGAATTCTCGGTGGTTCTGAGGTACCCTCAGTTTTTTCGTTTGATTGATGCCAAAGAAACTAGGAACAAGTACATTGAGGTTGTGGAGAGAGACCCTAGGTTAGGGACTTGTGCAATTGAGGATGTTAGGGAGAGGGTTTATAGAGAGAGAGGTGGTGATGCTGAGGATGTTAGGTTTTCTTTTGTGATTGATTTTCCACCTGGTTTTAAGATTGGGAAGTATTTTAGGATTGCAATGTGGAAGTGGCAGAGGCTTCCTTATTGGTCCCCTTATGAGGATGTTTCTGGGTATGATTTGAGGTCCATTGAGGCCCAGAAGAGGATGGAGAAGAGGGCTGTTGCCACCATCCATGAGTTGTTGTCGTTGACAGTGGAGAAGAAGATTACGCTGGAGCGGATCGCGCATTTCCGGATGGCGATGAACCTGCCCAAGAGGTTGAAGGATTTCTTGCTGCAGCAGCAGGGGATTTTCTATGTCTCCACCAGGGGGAATCAGGGGAAGCTCCACACTGTTTTCCTCAGGGAGGCGTATAGGAAGGGTGAGCTGATCGAGCCGAATGAGTTGTATTTGGCGCGGAGGAAGCTGGCCGAGCTCGTCCTGTTGAGCCCCCGGAAGGCTAATGTTGATAGGGAGTTGGTTGGGTACAGGAGGAGCAGGTTAGAGGATGAAATGGGGCAGGTAACGAGAGCGTATGTGGAGGATGCTTGTGAAGACTTTAAGGGTGAAGATGGTGTGGGGCAGGATAAGGATGCAGAGGATGATTTGACATCAGACATTGGTTCTGATGTTGATTTGGGAGATGAGGATGATGATTGTGTGGATACTGTGTCATTGCAGAGGACACCTTAG 1383 0.5358 MRVFASRTSNLFKLDHFPLIHNPNLNPFREFSQSTTIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQSLILSEPSQSLPISRLETLGRRFGFTRHEAGAFVLKFPHVFEIFEHPVQRILFCRLTRRAILQIEQERHALAAELPRAVTRLRKLLMMSNDGRLRLEHVRIARAAYGLPDDFEFSVVLRYPQFFRLIDAKETRNKYIEVVERDPRLGTCAIEDVRERVYRERGGDAEDVRFSFVIDFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKRLKDFLLQQQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNELYLARRKLAELVLLSPRKANVDRELVGYRRSRLEDEMGQVTRAYVEDACEDFKGEDGVGQDKDAEDDLTSDIGSDVDLGDEDDDCVDTVSLQRTP 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02619 460 MobiDBLite consensus disorder prediction 418 460 - -
Pumo6g02619 460 MobiDBLite consensus disorder prediction 435 450 - -
Pumo6g02619 460 MobiDBLite consensus disorder prediction 418 434 - -
Pumo6g02619 460 Pfam Plant organelle RNA recognition domain 44 380 IPR021099 GO:0003723
Pumo6g02619 460 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 30 401 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02619 Pumo-Chr6 62466742 62469837 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02619 - - gmx:100782167 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02619 6 62466742 62469837 Pumo6g02619 6 62466742 62469837 ECH