Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02565 ATGGAGGCACTAGAGGCTTGCCGCACGTGTCAGACGTCGACCTTCTCGAGTGCCGAAGAGAGGATGTGCTTGCCGAAGTTGTTCGAATCTACCAACGCTATCACCCTAAATGATGCCGCCATCTTGTATCAGCAAAAAGATATGCTTGGGTTCAACCCAAACGCACGACAGGGGAAGAGTAGGAAGGAATTAAGGAACAAGCAGGAAATTGCATTACAGATGTTAGAGCGCTCAACTCATTATTCCAACAGAATTAACCCATCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTTTTTCTATACAAAGGTTTTTTGTCGGACAAGGAGTGTGACTACCTTATTTCTTTGGCATATGCTGTGAAAGAAAAATCATCAGGGAATGGTGGCCTTTCTGAGGGGGTTGAAACTTCCTTGGATATGGAAGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGACTTTGCTTCCTAAAGAGTACAGCAAGCGTTTGCAGGCCATGCATTATGGGCCTGAGCAGAATGGTCAGAACTTAGATTATTTTACAAACAAAACCAAACTGGAATTAAGTGGACCTTTAATGGCAACAGTTGTTTTACATCTCTCAAATGCTACTCAAGGGGGTCAAATTCTCTTTCCTGAATCAGTGCCCAGGAGTAGCAGCTGGTCAAGTTGTAGTAATAGTAGCAATATTCTCCAACCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCAAGTGCTTCTCCTGACAAGAGTAGCTTCCATGCTAGATGCCCTGTCCTTGAGGGGGATATGTGGTCTGCAATTAAATACTTCTATGCAAAACCAATTAGTAGAGGCCAAGTCTCAGCCATATCAGATGGTGGTGATTGCACTGATGAGGATGACAATTGTCCTGCTTGGGCAGCCATGGGAGAATGTCAACGAAACCCCGTGTTTATGATTGGATCTCCTGATTATTATGGTACGTGTAGGAAAAGTTGTAATGCATGCTGA 1011 0.4352 MEALEACRTCQTSTFSSAEERMCLPKLFESTNAITLNDAAILYQQKDMLGFNPNARQGKSRKELRNKQEIALQMLERSTHYSNRINPSRVVQISWQPRVFLYKGFLSDKECDYLISLAYAVKEKSSGNGGLSEGVETSLDMEDDILARIEERLSVWTLLPKEYSKRLQAMHYGPEQNGQNLDYFTNKTKLELSGPLMATVVLHLSNATQGGQILFPESVPRSSSWSSCSNSSNILQPVKGNAILFFSLHPSASPDKSSFHARCPVLEGDMWSAIKYFYAKPISRGQVSAISDGGDCTDEDDNCPAWAAMGECQRNPVFMIGSPDYYGTCRKSCNAC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02565 336 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 67 276 IPR045054 -
Pumo6g02565 336 Gene3D q2cbj1_9rhob like domain 89 278 - -
Pumo6g02565 336 FunFam Probable prolyl 4-hydroxylase 12 89 278 - -
Pumo6g02565 336 ProSiteProfiles ShKT domain profile. 296 336 IPR003582 -
Pumo6g02565 336 SMART p4hc 97 278 IPR006620 GO:0005506|GO:0016705|GO:0031418
Pumo6g02565 336 SMART ShkT_1 295 336 IPR003582 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02565 Pumo-Chr6 60088993 60096446 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02565 K00472 - gmx:100795761 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02565 6 60088993 60096446 Pumo6g02565 6 60088993 60096446 ECH