Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02559 ATGTCTGATGCTACTATGGCAGTTGTGAAACCTGAGATGAAATCCTACATCTGGCTTCAAACTGTGGATGGTTCTATTCAGCAAGTAGAGGAAGAGGTGGCCATGTTTTGCCCCATGATTTGCCAGGAAGTACTTCAAACAGGCATGGGATCTTCCAAAACTTATGCTATATCTCTTCCACAACGTGTCAATCCTGCAATCTTGGGTTTGATACTTGATTACTGTCGGTTTCACCAAGTACCAGGACATTCTAATAAGGAGCGCAAAACTTTTGATGAGAAGTTTTTTCGGATGGATACAAAGAAGTTATGTGAGTTGACATCTGCTGCTGACAGCCTCCAACTGAAGCCTTTGGTTGACCTGACCAGCCGAGCACTTGCTCGGATTATTGAAGGAAAAACTCCTGAGGAGATTCGTGAAACATTTCATTTGCCTGATGATCTCACTGAGGAGGAGAAGCTGGAGCCTCTGAGAAACATAACTGATGATCCACGAATTCGACTTCTAAACAGATTATATGCTAGAAAGAGGAAAGAACTAAAAGAGCGGAAGAAACTGAAGGATGTTGAGGTTGAGGAGGAACCAAAGGATGAGCGTTCAGTTGAAGATCTTCTATCATTTATTAATGGTGCAGATGGAGATATAAAGGGAACTAGAGCAAATGCAGATATAAAGGGAACTAGAGCAAATAAAAATAAAAAGAAGAATAGGAGAAGGAAAGACCATGCAAAGGATCTTTCTTCAAAAAATGCAAATGAAAATGATAAGGAGTTGAATTCTCTTCCTTCTGCATATCACGATGTCAATTTTGACAATGCATTGGAGGCCTCTGCAAGTAAACACTCAAGGATGCAAAACCTTCCTGCTGTTAATTTTTCTCCAAAATTTGAATTTATTGATGGAGATGTTGACGATGATTTAGATCCTGCAATGAAGGAGGAGCTTGACAGGGAAGTGGAAGATTTTGCACGAAGATTAAATTCAGATTGGCCTGAAAGGATGCAAATTTTATCTTTGGGCCAAGACAGAAGACTAGTACCAATTTCTATGAATAGCAATGGTTCAATGCACCTGTATACAGGTTTTGATCAGAGATAG 1098 0.3998 MSDATMAVVKPEMKSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGMGSSKTYAISLPQRVNPAILGLILDYCRFHQVPGHSNKERKTFDEKFFRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKERKKLKDVEVEEEPKDERSVEDLLSFINGADGDIKGTRANADIKGTRANKNKKKNRRRKDHAKDLSSKNANENDKELNSLPSAYHDVNFDNALEASASKHSRMQNLPAVNFSPKFEFIDGDVDDDLDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLVPISMNSNGSMHLYTGFDQR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02559 365 MobiDBLite consensus disorder prediction 216 264 - -
Pumo6g02559 365 SUPERFAMILY POZ domain 15 79 IPR011333 -
Pumo6g02559 365 SMART skp1_3 14 115 IPR001232 GO:0006511
Pumo6g02559 365 FunFam SKP1-like protein 21 isoform X1 11 161 - -
Pumo6g02559 365 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Pumo6g02559 365 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Pumo6g02559 365 PANTHER SKP1 13 154 IPR016897 GO:0006511
Pumo6g02559 365 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
Pumo6g02559 365 Pfam Skp1 family, tetramerisation domain 17 79 IPR016073 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02559 Pumo-Chr6 59968095 59974501 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02559 - - gmx:100775387 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02559 6 59968095 59974501 Pumo6g02559 6 59968095 59974501 ECH