Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02546 ATGGCTTCTCGCCACGAACTCGAAGTGAAGCTCTTCTCAGCGCGCGGCCTCAAGAACGTGAACTGGCGCCACGGCCCCAACCGCCCATACGCCGTCGTTTGGGTCGACCCCAAGAACAAGTGCTCCACGCGCGTCGACGAAGACGGAGACACAGACGCCACCTGGGACCAAACCCTAGTTCTCCCCTTACCTCCAGAGCCCCTCGAGAACATCACTCTCTACATCGACGCCGTCCACGCCGGCTCCGAGAAGAACACCGAGCCGCTCATCGGTTCGGCTCGGCTCAAGCTCGTCGACGTCCTGGACGACGTCGGAATCGGCGAGCGCGCGAGCCGCGCGCTCGCCCTAAAGCGTCCCTCGGGGAGACCCCAAGGGAAGCTCGACGTTAGTGTTGTTATAAGAGAGTTTGGCTATCGTGCGCAGGGTGAGTACCACGCACCCCCTTATGGCGTGAGGGATTATAATAATAATAACTATTCCCCGTACGGTCAGGATGGTTATTATTCTGCGCCTCAAACGGCGTCGTATGGGCAGGGATATGCGGCGCCACTTCAGACGGCGTCGTATGGGCAGGAGTATGCGGGGGCTCATACGGCGTCGTATGGGCAGGGGAGCGGTTACGGTTATGAAGAGGAGAAGAAGAAGAGTAGTAAGTTTGGGGGGATGGGGACGGGATTGGCTGTGGGCGCGGTCGCTGGGGTTCTAGGTGGAGTCGCGCTCGTGGAGGGTGCTGAGTATGTGGAGGACAAGATTGAGGATGACGTGGCAGAGAAGGTTGAGGATGATCTTGGTTACGATGAAGATGATTTCTAG 813 0.5867 MASRHELEVKLFSARGLKNVNWRHGPNRPYAVVWVDPKNKCSTRVDEDGDTDATWDQTLVLPLPPEPLENITLYIDAVHAGSEKNTEPLIGSARLKLVDVLDDVGIGERASRALALKRPSGRPQGKLDVSVVIREFGYRAQGEYHAPPYGVRDYNNNNYSPYGQDGYYSAPQTASYGQGYAAPLQTASYGQEYAGAHTASYGQGSGYGYEEEKKKSSKFGGMGTGLAVGAVAGVLGGVALVEGAEYVEDKIEDDVAEKVEDDLGYDEDDF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02546 270 SMART C2_3c 6 109 IPR000008 -
Pumo6g02546 270 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 134 IPR035892 -
Pumo6g02546 270 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Pumo6g02546 270 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Pumo6g02546 270 PANTHER INGRESSION PROTEIN FIC1 5 230 - -
Pumo6g02546 270 Pfam C2 domain 6 100 IPR000008 -
Pumo6g02546 270 Gene3D C2 domain 2 142 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02546 Pumo-Chr6 59503882 59505020 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02546 - - gmx:100805876 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02546 6 59503882 59505020 Pumo6g02546 6 59503882 59505020 ECH