Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02520 ATGATGAAGGCTGGTGGAGATGCTCAGGAAATAGGGGCGTTTAAGGCAATGATGGCAAGGATTGCTTCAGGTCTAGCTCTAGGACTACTGTCCTTCAGCCATGTTGATCTTGAGGTACTCATTAAGGCCGGTCGTCCGAAAGATACAAAACATGCAGAAAGGATTCAACCTTTTGTAAAGAATGGACATTTTGTCCTGTGTACACTTCTTCTAGGAAAATCACTGGCCATGGAGGCACTACCAATTTTTATGGACTCAATCATCCCAACTTGGTTTACTATTCTGGTGTCAGCACCCTTGGTGACTGTGTTTGCAGAGATTTTACCTCAAGCTGTGTGCTCTCGGTATGGACTAACTTTAGGAGCAAAAATGGCTCCCTTTGTTCAACTACTTCTTCTGATCTTCTTCCCTATAACCTATCCTGCTAGTAAGGTGCTGGATTGGGCTCTAGGGAAAGAACATTCAGTTCTTTTGAGAAGGTCAGAGTTGAAGACATTTGTGGACTTACATGCAAATGAGGCAGGGAAAGGTGGAGAATTGTCACATCATGAAACTTCTATAATCACAGGTGCTATGGATTTGACTCAAAAGACAGCTAAAGATGCAATGACACCCATATCTGAAACTTTTTCTCTTGATATAAATTCAAAACTTGACATGCATACAATGACACAAATAATGAGTAAAGGTCACAGTCGAATACCTATACATTCTGGACACCCAAGAAATATTATTGGTCTCATATTGGTTAAAAACTTGATATTCAGCCGCCCAGAAGATGAGACCCCAATAAAGAATTTGATTATTAGGAAAATTCCAAGGGTTTATGAAAGTTGGCCACTATATGAGATATTGAATCAATTCCAGAAGGGTCACAGCCATATGGTTGTTGTCTTGAAATCCAACAAAGACACAGAGAACACTCCAGCTCATGCTGTGGGTGCACCTACCTTTTTGAATACAATTACACATAAAATATCAAACCAAGCTCAAGTTGCTGTAGAATCTGATTCTTCCTTTGTCCTGGAAATAAGTCAGAGAAGTTCTGTACATGAATCCAGTTTAAACTCTAGTGATGCAGAATTTCATAGTCCAACATTAAAAAATGTCATGGAACTAAACAGAGAAGTAGGTCAAGAATCCAGCCAGTGGGAACAAGAAAATGAATATTTCTCACAAGAACAAATAGAGTCTCTTCCAGATGTTATAGATGAGGAAGTTATTGGCATCATCACAATGGAAGATGTCATGGAGGAACTGTTACAGGGAGACATACTGGATGAAACTGATGAATATGTTCACGTTCAAAAGAAGTGA 1317 0.3948 MMKAGGDAQEIGAFKAMMARIASGLALGLLSFSHVDLEVLIKAGRPKDTKHAERIQPFVKNGHFVLCTLLLGKSLAMEALPIFMDSIIPTWFTILVSAPLVTVFAEILPQAVCSRYGLTLGAKMAPFVQLLLLIFFPITYPASKVLDWALGKEHSVLLRRSELKTFVDLHANEAGKGGELSHHETSIITGAMDLTQKTAKDAMTPISETFSLDINSKLDMHTMTQIMSKGHSRIPIHSGHPRNIIGLILVKNLIFSRPEDETPIKNLIIRKIPRVYESWPLYEILNQFQKGHSHMVVVLKSNKDTENTPAHAVGAPTFLNTITHKISNQAQVAVESDSSFVLEISQRSSVHESSLNSSDAEFHSPTLKNVMELNREVGQESSQWEQENEYFSQEQIESLPDVIDEEVIGIITMEDVMEELLQGDILDETDEYVHVQKK 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02520 438 ProSiteProfiles CNNM transmembrane domain profile. 1 184 IPR002550 -
Pumo6g02520 438 CDD CBS_pair_CorC_HlyC_assoc 198 299 IPR044751 -
Pumo6g02520 438 Pfam Cyclin M transmembrane N-terminal domain 21 181 IPR002550 -
Pumo6g02520 438 SUPERFAMILY CBS-domain pair 187 302 IPR046342 -
Pumo6g02520 438 Gene3D - 184 324 IPR046342 -
Pumo6g02520 438 FunFam DUF21 domain-containing protein 182 315 - -
Pumo6g02520 438 PANTHER METAL TRANSPORTER CNNM 16 437 IPR045095 GO:0010960
Pumo6g02520 438 Gene3D - 360 428 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02520 Pumo-Chr6 58790740 58797490 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02520 K16302 - gmx:100791387 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02520 6 58790740 58797490 Pumo6g02520 6 58790740 58797490 ECH