Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02514 ATGCAACATAGCTCGATGTTGATACAATATGTCCCTAAGGGTATATATGGCATTTTTAAGGCTCTGTTTTCCTCCAAACTGGAACCGCTTAATGGCTTGATTGACCTAGCTGTCCTCAAGATGCTTGCACTGACAGATTCTCGTCTACTTATTGCTAAAACATTTGAAGCAATTAAAATACCAGCAAGTACACGAGGCACTGTGGTATGTGCTGCAAAAGGTCCAAGACCAAGATATCCCCGAGTTTGGAAGACCCATACAAAAATTGGGACCATTTCCAAGGCTGCTAAGCTTGTTAAGTCTATTAAGGAACTGTCAAATGTCAAAGAGGAAGTTTATGGAGCTCTTGATTCCTATGTTGCATGGGAATTAGAGTTCCCTTTAATTACAGTGAAAAAGGCTCTCAAGACCCTAGAATTCGAACAAGAGTGGAAGCGGGTAATACAGGTAACAAAATGGATGCTTAGCAAAGGTCAAGGAAAGACAATGGGAAGCTATTTCACATTACTTAATGCTTTAGTAGAGGATGACCGTCTTGACGAAGCTGAAGAGCTTTGGACAAAGTTATTAATGCAGTACATGGAAAGTTTGCCTCGTAGATTTTTTGATAAAATGATTTCTATCTACCGTAAGAGGGGCATGCATGAGAAGATGTTTGAGATATTTGCAGACATGGAGGAGCTTGGTCTTCGACCTAATATGGCTGTTGTTTCGATGATTGGGGATGCCTTCAAAGAGCTGGGTATGCTAGACAAATACCAGAAGTTACATACGAAATATCCACCACCGGAATGGGAAAATAGATACATCAGAGGCAAGCGTGTAAAAGTCAAAGTGCAAGTTCAGTCTAATCAGGTGAACACATACATAGAAAGGCAAGAGAATGTTGAACTGAACTCAGACATATACAAGAATTATAGATCTGAAGAGACTTCAGACTCGGAGATTGTTGATGATCAACAACTCAGACTGGATGTGGATGTAATATCCGTGGAACCTGAACAAATTTCAGACATAAGCAACAATTATAGATCTGAAGAGACTTCAGAGATAATTGATGATCAGCAACTCAGACAGGATGTGGATGTAATTTCCACTGAACTTGAACAAATTTCAGATGATTCATATGGCAGTATGGAACCTATTTTAGATTTCCTGTTACGAGATCGAGATGGAGCGCGAACACCTCAACTACAACCGTTTGATAGGACCAGTATTGTGGTGCCCATCAACCCCAGCGACGCTCACAGGCTGTTTTTTGACATGAAGAATCGTGGGCATTACCCAAATGTTGTTTCTTTTCACCACTTTGATGAATGGGTACTGCTTGGTTGGTGCGATGACGGACACGCGCAAGGTGTTCGACTGAGCTTTTGA 1377 0.411 MQHSSMLIQYVPKGIYGIFKALFSSKLEPLNGLIDLAVLKMLALTDSRLLIAKTFEAIKIPASTRGTVVCAAKGPRPRYPRVWKTHTKIGTISKAAKLVKSIKELSNVKEEVYGALDSYVAWELEFPLITVKKALKTLEFEQEWKRVIQVTKWMLSKGQGKTMGSYFTLLNALVEDDRLDEAEELWTKLLMQYMESLPRRFFDKMISIYRKRGMHEKMFEIFADMEELGLRPNMAVVSMIGDAFKELGMLDKYQKLHTKYPPPEWENRYIRGKRVKVKVQVQSNQVNTYIERQENVELNSDIYKNYRSEETSDSEIVDDQQLRLDVDVISVEPEQISDISNNYRSEETSEIIDDQQLRQDVDVISTELEQISDDSYGSMEPILDFLLRDRDGARTPQLQPFDRTSIVVPINPSDAHRLFFDMKNRGHYPNVVSFHHFDEWVLLGWCDDGHAQGVRLSF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02514 458 Gene3D Tetratricopeptide repeat domain 93 260 IPR011990 GO:0005515
Pumo6g02514 458 Pfam PPR repeat 205 230 IPR002885 -
Pumo6g02514 458 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 198 232 IPR002885 -
Pumo6g02514 458 NCBIfam pentatricopeptide repeat 203 233 IPR002885 -
Pumo6g02514 458 PANTHER OS01G0757700 PROTEIN 58 314 IPR044646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02514 Pumo-Chr6 58756052 58759865 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02514 - - gmx:100809627 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02514 6 58756052 58759865 Pumo6g02514 6 58756052 58759865 ECH