Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02490 ATGGCTCAGGTCGTGGCCTCACGATCCATTCAAAGCACCCCTTTGTGCCCCTCTTCTGGATCTGCACGTGACAGGGCCCAAAACCTGTTAAAGCCTCCATCTTTTGCTTCCAAGGTGTTGTTCCCTTTTAACAAACGCTCCCAACTCGGCCTCAGAAGCTTTCAGATCAGTGCAAGGAAATCTGCCCCTTCTGAAGTCATTCCCGTGTCACCCGAGGATGATCCAAAGATTGAGGAGCATTTGCAACATTTACGTGGGGTGCAGCCATTTGGTGAGAATTCGGCTGGGATGTGGTCCAAGCCCACGTTCAGGCGCAAGACAAAGATTGTGTGCACCATTGGACCTTCTACCGACACGAGGGAAATGATTTGGAAGCTGGCTGAGGCTGGCATGAATGTTGCTCGGTTGAATATGTCTCATGGGGACCATGCTTCTCATCAGAAAGTTATTGACTTGGTTAAGGAATATAATGCTCAAACCAAGGACAATGTGATTGCAATCATGCTTGACACAAAGGGTCCTGAAGTTAGGAGTGGGGATTTGCCACAACCAATTACATTATTGCCTGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTATGATGATTTTGTCAATGATGTGGAAGTGGGGGACATGATTCTTGTTGATGGTGGTATGATGTCTATGGTGGTTAAGTCTAAGACACAGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAGTCAAGGCGACATTTGAATGTTAGAGGAAAAAGTGCAACACTGCCTTCAATCACTGAGAAGGATTGGGATGATATCAAGTTTGGAGTGGATAACAAAGTTGACTTCTATGCTGTTTCTTTTGTTAAGGATGCTGAAGTTGTTCATCAATTGAAGAATTATTTGAAGAGTTGTGGTGCTGATATACATGTCATCGTAAAAATTGAAAGTGCAGACTCTATACCAAATTTGCATTCAATTATCACTGCATCTGATGGGGCTATGGTTGCCAGAGGAGATCTTGGCGCTGAGCTCCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAACTTGTGTCGTAGCATGGGAAAGGCTGTTATTGTGGCAACAAATATGCTAGAAAGCATGATTGTTCACCCAACTCCAACCAGAGCAGAGGTAGCAGATATAGCAATTGCTGTTCGAGAAGGTTCTGATGGAATAATGCTGTCTGGAGAAACAGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCATTGCGGACAGAAGCTACTATTCCAGGTGGACAAATGCCACCTAACATTGGTCAAGTGTTCAAGAACCACATGAGCGAAATGTTTGCATACCATGCAACCATGATGTCCAACACCCTTGGAACCTCAACTGTTGTCTTCACTAGAACGGGTTTCATGGCTATCCTACTGAGCCACTATCGTCCTTCTGGCACCATATTTGCTTTTACAGATGAGAAGAGGGTACAACAGAGGCTGGCTTTGTATCAAGGAGTCTGTCCCATATACATGGAATTCTGTGAAGATTCTGAAGCAACTTTCAGAAGAGCCTTGGATTTGCTGCAGAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGTAGGCAACCAATATGGAGGTTCCAATCCACTCACAATATCCAGGGATGGGTATATGGAATAGAACATCTGTCTCATGATTACCTTAGACCACAAGATAATTTCTATAACAAAGTGAAATTTATAAGCCTGGCAAACCACATTCAGTTTAGCATTCAACCAATCATTGCATCAATGATAAGGTTTCAGATTATGGCCTTGCAATTCACAGTTCATGGTTTAACCAAACTATTTGACAACATGTTTTCTTCATAA 1920 0.4328 MAQVVASRSIQSTPLCPSSGSARDRAQNLLKPPSFASKVLFPFNKRSQLGLRSFQISARKSAPSEVIPVSPEDDPKIEEHLQHLRGVQPFGENSAGMWSKPTFRRKTKIVCTIGPSTDTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQTKDNVIAIMLDTKGPEVRSGDLPQPITLLPGQEFTFTIQRGVGTADCVSVNYDDFVNDVEVGDMILVDGGMMSMVVKSKTQDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHQLKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVADIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPIYMEFCEDSEATFRRALDLLQKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQGWVYGIEHLSHDYLRPQDNFYNKVKFISLANHIQFSIQPIIASMIRFQIMALQFTVHGLTKLFDNMFSS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02490 639 Pfam Pyruvate kinase, barrel domain 105 440 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 Pfam Pyruvate kinase, alpha/beta domain 462 554 IPR015795 -
Pumo6g02490 639 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Pumo6g02490 639 Gene3D - 175 268 IPR015806 GO:0004743|GO:0006096
Pumo6g02490 639 PANTHER PYRUVATE KINASE 82 552 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 PRINTS Pyruvate kinase family signature 163 179 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 MobiDBLite consensus disorder prediction 1 26 - -
Pumo6g02490 639 FunFam Pyruvate kinase 270 435 - -
Pumo6g02490 639 SUPERFAMILY PK C-terminal domain-like 423 558 IPR036918 -
Pumo6g02490 639 NCBIfam pyruvate kinase 105 557 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Pumo6g02490 639 FunFam Pyruvate kinase 175 268 - -
Pumo6g02490 639 Gene3D - 107 432 IPR040442 -
Pumo6g02490 639 Gene3D - 434 568 IPR036918 -
Pumo6g02490 639 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 97 439 IPR015813 GO:0003824
Pumo6g02490 639 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g02490 639 FunFam Pyruvate kinase 436 555 - -
Pumo6g02490 639 SUPERFAMILY PK beta-barrel domain-like 174 265 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02490 Pumo-Chr6 57597870 57607628 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02490 K00873 - gmx:100803036 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02490 6 57597870 57607628 Pumo6g02490 6 57597870 57607628 ECH