Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02389 ATGCGTACTACAGCAGAATTTCAAGCTTCTGTTCTGAATCTCCGTGGGGTTCAGGTTCACTCCATGGAGGGTTCAAGCATGGATCAAGAGCTTGATTTGTTCCAGAAACATGTGACCGAGCAGTTCCTGGAGCTATCTTCGGTTGAAAGTGATGAATTGCTCTCTCTTTCATGGGTCAGGAAGCTGCTAGATTCGTTCCTGTGTTGCCAAGAGGAGTTCAGGGTGATTCTCCACAATCACAGGGCTCAGGTGTTGAAGCAGCCTCTCTTGGATCGCATGGTGGGTGAGTTTTTTGAACGGAGTGTGAAGGCACTTGATGTGTGCAACGCAGTCCGTGATGGGGTTGAGCAGATAAGGCAGTGGCAGAAGCTGTTGGAGATTGTTCTCTGTGCTTTGGATCACAAGAGGAGCATTGGTGAGGGCCAATTTCGCCGCGCCAAGAAGGCGCTTGTTGATTTGGCCATTGGGATGCTTGATGATAAGGACTCCAGCTCCAGTGGTTCTATTGCACATAGGAACAGGTCATTTGGTAGAAACAATGCTTCAAAGGATCATCACCACAATTCCTTTTGTCATTTTAGGTCACTCTCTTGGAGTGTGTCAAGGAATTGGTCTGCTGCTAGGCAGCTTCAAGCAATTGGGAACAACTTGTCCCCTCCTAAGGCTAATGATATTGTTGCCACTAATGGCCTTGCATTGCCTATTTACACAATGAGTTGTGTTCTGGTGTTTGTGATGTGGGCCCTTGTGGCGGCGATTCCCTGCCAGGACCGCGGGATGGGGCTCCATTTCTCGGTGCCGAGGCAGTTCTCCTGGGCGGCTCCGGTGGTGGCGCTGCACGAGCGGATCGTGGAGGAGTCCAAGAAGAGGGAGAGAAAGAACACCTGTGGCTTGCTGAAGGAGATTCACCAGATTGAGAAGTGTGCTAGGGTGATCAATGAGCTGGCTGATTCTGTGCAGTTTCCATTGAGTGAGGAGAAGGGGGAGGAGGTTAGGCAGAGAGTGCAAGATGTTTCGAAGGTGTGTGAAACCTTGAAAGATGGACTGGATCCTCTGGAGCGCCAAGTGAGGGAGGTGTTTCATAGAATTGTGCGCAGCAGAACTGAAGGGCTTGACACTCATGGTAGAGGGTAA 1134 0.5035 MRTTAEFQASVLNLRGVQVHSMEGSSMDQELDLFQKHVTEQFLELSSVESDELLSLSWVRKLLDSFLCCQEEFRVILHNHRAQVLKQPLLDRMVGEFFERSVKALDVCNAVRDGVEQIRQWQKLLEIVLCALDHKRSIGEGQFRRAKKALVDLAIGMLDDKDSSSSGSIAHRNRSFGRNNASKDHHHNSFCHFRSLSWSVSRNWSAARQLQAIGNNLSPPKANDIVATNGLALPIYTMSCVLVFVMWALVAAIPCQDRGMGLHFSVPRQFSWAAPVVALHERIVEESKKRERKNTCGLLKEIHQIEKCARVINELADSVQFPLSEEKGEEVRQRVQDVSKVCETLKDGLDPLERQVREVFHRIVRSRTEGLDTHGRG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02389 377 Pfam Protein ROH1-like 6 373 IPR008511 -
Pumo6g02389 377 MobiDBLite consensus disorder prediction 162 181 - -
Pumo6g02389 377 MobiDBLite consensus disorder prediction 162 176 - -
Pumo6g02389 377 PANTHER BPS1-LIKE PROTEIN 10 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02389 Pumo-Chr6 47637619 47639859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02389 - - gmx:100776285 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02389 6 47637619 47639859 Pumo6g02389 6 47637619 47639859 ECH
Pumo6g02389 6 47637619 47639859 Pumo3g01128 3 18121503 18124908 PCT