Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02387 ATGGTGAACAATGTCGTTCAGAGTTGGCATGATCAGCAATTGTTATGCAAAAGTGGGGAGGTGAAGGCGTCTAATGTTAACTCTTCTTGGAATCATCCCCCTCATGGGAAGTTCAAACTAAGTTGTGATGGGGCAGTAGCTCAAGGTGGTCAGGCGGCATGTTGTGGTATCCTCAGGGATCACAATGGCACAACATTTTTTTGCATATGCCTTCAACTTGGGACAACAGAGATGGATCTGGAATTGGGACTCAAAATCACTAGAACTAGAGATGACATTGCTTCCATCTCTGAGTATCGATTGGCAAAAGCAGGACCTATCTTTCAATCTAGAGAAACAAACACCATGTTCATCCTCACTGCTCATCTTAAAGGTTATAAGAGGAATAGCATTAACATCAAGATTAGTGAAGATGGTAGTAAGATATCAATTAGTGGAGAGAAGCCTGTTCAGAATATTTTGATGATGGGATGGGTAATGCATAGGAAAGAGGTTGATGTTGCAGGGTTCAATAAGGTTTTCAAAATTCCTGATGGGGTGAAATTGGATGGGATCAAAGCGAAGCATGATGAGGAGGAATGGACATTGAATATTTTCATGCCAAAATTGGTTAAAGGAATTTGTGGGGCTAGGATTGAAGAGGTCAAGGAAGAATCAAAAAGCGGGGGATCAGAACTAGAGAAAAGTGAAGCTGATCAAATTCTTGGTAGTGTTGGAGAGACAAGCCAAAAAGGATCTAAAGAGTCTGAAGTTCAGGCAATGGAGGAGGACAGTGAAAGTTTCATGGAGAAGAAGGAAGGAGGAGCATCTGACAAGAAGATTGATGATTCCAATAGGGAAATAATTAAGGAGAAAATACAAAAAGAAGTAGAAGAATCTAATTTAGGAACTGAAGATGGAAATGGAGAAAGTTCTGGAGTGAAGGGTGGAATGGAAGGATATGAAGTAACTGCAGACATCAGAACTAGAGCCGAATGTTGGTGA 984 0.4085 MVNNVVQSWHDQQLLCKSGEVKASNVNSSWNHPPHGKFKLSCDGAVAQGGQAACCGILRDHNGTTFFCICLQLGTTEMDLELGLKITRTRDDIASISEYRLAKAGPIFQSRETNTMFILTAHLKGYKRNSINIKISEDGSKISISGEKPVQNILMMGWVMHRKEVDVAGFNKVFKIPDGVKLDGIKAKHDEEEWTLNIFMPKLVKGICGARIEEVKEESKSGGSELEKSEADQILGSVGETSQKGSKESEVQAMEEDSESFMEKKEGGASDKKIDDSNREIIKEKIQKEVEESNLGTEDGNGESSGVKGGMEGYEVTADIRTRAECW 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02387 327 CDD ACD_sHsps-like 111 202 - -
Pumo6g02387 327 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 98 218 IPR002068 -
Pumo6g02387 327 Gene3D - 83 207 IPR008978 -
Pumo6g02387 327 PANTHER HEAT SHOCK PROTEIN 26 78 292 - -
Pumo6g02387 327 MobiDBLite consensus disorder prediction 217 313 - -
Pumo6g02387 327 MobiDBLite consensus disorder prediction 249 295 - -
Pumo6g02387 327 Pfam Hsp20/alpha crystallin family 111 203 IPR002068 -
Pumo6g02387 327 SUPERFAMILY HSP20-like chaperones 106 202 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02387 Pumo-Chr6 47620119 47623998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02387 - - gmx:100806444 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02387 6 47620119 47623998 Pumo6g02387 6 47620119 47623998 ECH
Pumo6g02387 6 47620119 47623998 Pumo3g01129 3 18137115 18139454 PCT