Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02312 ATGGCCATAAAGGCAATTGAGTTGTTGAAAGGAAGTGCAGGTCATGAAGAGATATTGGAAGTTCTTGCAGCAGTGGCTGCAGATTTGGGGGATGTAATAGATGATTTGAACTCTTTGCAGGTAAAACCTCTAAAGGGGGCAATGACCAATGAGGTTTTTGAGGTAAATTGGCCAACCAAAAGTGATGGTCATCAAAGAAGGGTTCTTGTTCGATTATATGGTGAAGGTGTTGAGGTTTTCTTCAACAGGGTGGATGAAATCCAAACCTTTGAGTGCATGTCAAAGCATGGACATGGTCCACGCCTTCTTGGGAGGTTCACCACTGGCAGAGTTGAGGAGTTCATCCATGCCAGAACACTCTCAGCTGCGGACCTCCGTGACCCTGAAATATCTGCTTTGATAGCATCTAAGATGAGGGAGTTTCACAATCTTCATATGCCTGGTGCAAAGAAGACTCAGCTTTGGCAGAGAATGAGGAAGTGGCTTAGTCATGCCAGAAGTTTGTGCTCCCCAAAAGAAATCAAGAATTTTGGCCTGGACAATCTAGATGCTGAAATAAACATGCTTGTGGAGTTGTTATCTCAAGGATATCATGAGATTGGTTTTTGTCACAATGATCTACAATATGGTAACATAATGATAGATGAAGATACAAAAGCAATCACTTTAATTGACTATGAATATGCCAGTTACAATCCTATTGCATATGATCTGGCAAATCATTTCTGTGAAATGGTGGCAAATTACCATAGTGACGAACCTCATGTTCTTGACTACAGTAAATATCCTGGTCTGGAGGAGCGTCAAAGGTTTGTTTATAATTATTTGAGTTCTGAAGGTAAGAAACCAAGCAATAGTGAAGTGGAGCAGTTAGTAAATCTTGCAGAAAAATACACTCTTGCAAACCATCTATTTTGGGGCTTGTGGGGACTTATTTCGAGCCATGTCAATACAATTGACTTTGACTACAAGGAGTATGCAAGGCAGAGGTTTCAGCAATACTGGTTTAAGAAGCCTACTTTATTGGACTCACCAAGTATCATTTCCCAAGATGGAATTGTCAATGGTGTGAACCATTGA 1080 0.4083 MAIKAIELLKGSAGHEEILEVLAAVAADLGDVIDDLNSLQVKPLKGAMTNEVFEVNWPTKSDGHQRRVLVRLYGEGVEVFFNRVDEIQTFECMSKHGHGPRLLGRFTTGRVEEFIHARTLSAADLRDPEISALIASKMREFHNLHMPGAKKTQLWQRMRKWLSHARSLCSPKEIKNFGLDNLDAEINMLVELLSQGYHEIGFCHNDLQYGNIMIDEDTKAITLIDYEYASYNPIAYDLANHFCEMVANYHSDEPHVLDYSKYPGLEERQRFVYNYLSSEGKKPSNSEVEQLVNLAEKYTLANHLFWGLWGLISSHVNTIDFDYKEYARQRFQQYWFKKPTLLDSPSIISQDGIVNGVNH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02312 359 CDD ETNK_euk 39 335 - -
Pumo6g02312 359 Gene3D Phosphorylase Kinase; domain 1 34 83 - -
Pumo6g02312 359 SUPERFAMILY Protein kinase-like (PK-like) 35 341 IPR011009 -
Pumo6g02312 359 Gene3D - 84 342 - -
Pumo6g02312 359 PANTHER CHOLINE/ETHANOALAMINE KINASE 17 343 - -
Pumo6g02312 359 Pfam Choline/ethanolamine kinase 65 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02312 Pumo-Chr6 45267299 45273717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g02312 17 342 Acyl Lipid Metabolism Gene Families AT1G74320 65.644 3.45e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02312 K14156 - gmx:547972 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02312 6 45267299 45273717 Pumo6g02312 6 45267299 45273717 ECH
Pumo6g02312 6 45267299 45273717 Pumo3g01167 3 18852644 18853304 PCT