Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02275 ATGGCCATGTTCGATTCCATCTTCAACAAAGGTTTTAAGGCTGCCAAATGTAAAACACTGCTGAAGCTGACAATCCCACGTATAAAGCTGCTAAGAAACAGAAGAGAGATTCAGTTGAAGAACATGCGGCGTGAGATTGCCAAGCTACTTGAGACTGGCCAAGAAGCCACGGCTCGAATTAGGGTAGAACATATTATAAGAGAGGAGAACATGATGGCTGCTCAAGAAATCATTGAACTCTTTTGCGAACTTATTGCGGTCCGCCTTCCAATAATTGAATCTCAAAGGGAATGTCCCCTTGACTTGAAGGAAGCCATATCTAGTGTATGTTTTGCTGCACCAAGGTGTGCGGATTTGCCAGAGTTGTTGCAGGTTCAGGTGTCATTTGCTGCCAAATATGGGAAGGAATTTTTATCTGCTGCAACTGAGCTCAGGCCAGACTGTGGTGTTAATCGCCAGTTAATAGAGCTGCTTTCAATTCGTGCTCCTTCACCAGAAAAGAAACTAAACCTTCTAAAAGAAATTGCTGTTGAGCATGATTTAGATTGGGATCCAGAAGCTTCAGAAACTGCGTTGTTTAAAAAACATGAAGATTTATTGAATGGCCCCACCCAATTTGTTAGTGGGTCCAAGTTGCCCCTTCCAGATGAAAAACACAATGAAGAGATACACTCCACTCATATACCCAATAAAGAACAACCTGATTCTAATTCTGGCTCTGACACATTAGAATTTCCTGAAGTTCCCAAGGTATCAGTCCGGCCAAATGCAAATGTTGCCACAGCTCCAGAAATGGTTACACCTCTGACTATGGAACCCCTTGATGTTGATCTTGATTCACCAAGACATTCCGGAGATTTTGCAGAGGTGAAGCAGGAGCAAGTTGAAGATAGATCAACAGTTCACAAAGATGAACCCCACACTTCAATTGGCAAAATGGAGAATAAAAAGTTTCTGCCATTCATCTCCCCTCCATCAGTATCATCTGGATCATTTTCTGCAAGACATAGTGACTCACCTCCCTCCTTCTCAAGCACAAAATCTGAAGCCAATGTGGACTTACAGGATGTGTTGGCTGCTGCCCATGCTGCTGCTGAAACTGCTGAACGTGCAGCAGCTGCAGCTCGCACAGCGGCCAGCCTTGCTCAAGTCCGAATTAATGAGCTGACTAAGAGGAAAAGTAGTGAACATGTGCCTGACAGCAACTCTGAGAACCCATTTTATGCAGGTGGTGATAATGAATCTCCAACAATAGAAAAGCATTTTGCTGAGCAAAATCCTGCAGGTAACTCTGATGTCCATAATAGAAATGGTGTTGAACATCACCAAGGTCATTATGCTTCCCCAGGCTTTCATTCATCAAGTTTTCCTTCTTTTGACACACTCAAGGAAGATTTTGATTCTTCCCTACCCAATGATCATGTCTTGGATGACAAATCCTCGTGTCACCAGCCTAAGAGATTACCTTCAATGGACGACGACTCATACTTCTCATACCCCAACTTATTTACCGCTCAAAACTCTAATGTTGGATCCCAGACTCATTCAGATAATAGCCGTTCCCCGCATGATCTGTGA 1578 0.4341 MAMFDSIFNKGFKAAKCKTLLKLTIPRIKLLRNRREIQLKNMRREIAKLLETGQEATARIRVEHIIREENMMAAQEIIELFCELIAVRLPIIESQRECPLDLKEAISSVCFAAPRCADLPELLQVQVSFAAKYGKEFLSAATELRPDCGVNRQLIELLSIRAPSPEKKLNLLKEIAVEHDLDWDPEASETALFKKHEDLLNGPTQFVSGSKLPLPDEKHNEEIHSTHIPNKEQPDSNSGSDTLEFPEVPKVSVRPNANVATAPEMVTPLTMEPLDVDLDSPRHSGDFAEVKQEQVEDRSTVHKDEPHTSIGKMENKKFLPFISPPSVSSGSFSARHSDSPPSFSSTKSEANVDLQDVLAAAHAAAETAERAAAAARTAASLAQVRINELTKRKSSEHVPDSNSENPFYAGGDNESPTIEKHFAEQNPAGNSDVHNRNGVEHHQGHYASPGFHSSSFPSFDTLKEDFDSSLPNDHVLDDKSSCHQPKRLPSMDDDSYFSYPNLFTAQNSNVGSQTHSDNSRSPHDL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02275 525 Coils Coil 32 59 - -
Pumo6g02275 525 Gene3D - 5 192 IPR042277 -
Pumo6g02275 525 MobiDBLite consensus disorder prediction 327 348 - -
Pumo6g02275 525 PANTHER IST1 FAMILY MEMBER 14 505 IPR005061 GO:0015031
Pumo6g02275 525 MobiDBLite consensus disorder prediction 391 525 - -
Pumo6g02275 525 MobiDBLite consensus disorder prediction 204 249 - -
Pumo6g02275 525 MobiDBLite consensus disorder prediction 448 462 - -
Pumo6g02275 525 MobiDBLite consensus disorder prediction 214 229 - -
Pumo6g02275 525 MobiDBLite consensus disorder prediction 466 490 - -
Pumo6g02275 525 MobiDBLite consensus disorder prediction 290 310 - -
Pumo6g02275 525 FunFam IST1-like protein isoform A 6 192 - -
Pumo6g02275 525 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Pumo6g02275 525 MobiDBLite consensus disorder prediction 497 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02275 Pumo-Chr6 43491177 43496132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02275 - - gmx:100805899 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02275 6 43491177 43496132 Pumo6g02275 6 43491177 43496132 ECH