Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g02269 ATGGGAGATAACAAGGACCAGGATTTCTTTTCCCACAAATTCCCCACAACCTCTCAGGTGATGGAAGAGATGAAGGAGCTGTGGGGCATGGCTCTACCAATCACAGCTATGAACATGTTGGTGTTTGTGAGGGCAGTGGTTTCAGTCCTCTTTTTGGGCAGGCTAGGAAGCCTAGAGCTAGCAGGTGGTGCACTTTCCATAGGCTTCACCAACATAACAGGGTACTCTGTTCTGGTGGGTCTTGCAGCAGGCCTAGAACCAGTGTGCAGCCAAGCCTATGGGAGCAAGAACTGGGACCTCCTCTCTCTCTCTCTGCAACGCATGGTCCTCATCCTCCTCATGGCAATAGTCCCCATAAGCCTTCTCTGGCTGAACCTGGAGAGGATCATGCTGTTCATGGGGCAGGACAGTGCCATCACAGGAATGGCATCACTCTACTGCTTCTACTCTCTCCCAGACCTTTTAACAAACACCTTGCTGCAGCCCTTAAGGGTGTTTCTGAGGTCTCAAAAAGTGACCAAACCTATGATGTATTGTTCCCTTGTGGCAGTTCTGTTCCATGTGCCACTGAACTATTTGTTGGTGGTGGTGATGGGGCTGGGGGTGCCAGGGGTGGCCATGGCTTCTGTGATGACCAATCTGAACATGGTGGTGCTGATGGCAGGGTATGTGTGCGTGTGCAGGAAGAGGGAGGTGGTGCTGAGGTGGGGGTGTGGAGGGGTGTGTACTTCTTCTGGGTTGGGGCAGTTGATGGGGTTTGCTGTGCCTAGTTGCCTTATGATATGTTTGGAGTGGTGGTGGTACGAGATTGTGACTGTGCTAGCTGGGTACTTGCCACGTCCAACACTCGCTGTGGCTGCCACTGGTATTCTGATTCAGACAACTAGCATGATGTACACTGTCCCCATGGCACTTGCAGGTTGTGTTTCTGCCAGGGTAGGGAATGAGCTTGGAGCTGGGAAACCATACAAGGCAAAGCTAGCAGCAATGGTTGCCCTAGGATGTGCTTTTGTGATAGGCTTCATCAATGTGACATGGACTGTGATATTGGGTCAAAGATGGGCCGGGCTTTTCACCAATGACGAGCCTGTCAAAGCCTTGGTTGCATCAGTGATGCCAATTATGGGCCTGTGTGAGCTTGGGAACTGCCCACAAACCACGGGCTGTGGGATCCTTCGTGGCACGGCCCGGCCCGGCATTGGGGCCCACATAAACCTGGGCTCATTCTACTTCGTGGGCACCCCGGTGGCCGTGGGCCTGGCATTTTGGTTCAAGGTTGGGTTCAGTGGGCTTTGGTTTGGGCTTCTGTCGGCCCAGGTGGCATGTGCTGTATCAATCCTCTATGTTGTGTTGGTGAGGACAGATTGGGAAGCTGAGGCTTTGAAGGCTGAGAAGCTCACAATGGTTGAAATGGGTAGTTGCAATGGGCTTAGGAATGAGAAAGATGAGGAAAGCAAAGGGTTGTTGGGGAATGCAAATGGGAACAACAAAGATGACATTTGCTAA 1506 0.5212 MGDNKDQDFFSHKFPTTSQVMEEMKELWGMALPITAMNMLVFVRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLAAGLEPVCSQAYGSKNWDLLSLSLQRMVLILLMAIVPISLLWLNLERIMLFMGQDSAITGMASLYCFYSLPDLLTNTLLQPLRVFLRSQKVTKPMMYCSLVAVLFHVPLNYLLVVVMGLGVPGVAMASVMTNLNMVVLMAGYVCVCRKREVVLRWGCGGVCTSSGLGQLMGFAVPSCLMICLEWWWYEIVTVLAGYLPRPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAAMVALGCAFVIGFINVTWTVILGQRWAGLFTNDEPVKALVASVMPIMGLCELGNCPQTTGCGILRGTARPGIGAHINLGSFYFVGTPVAVGLAFWFKVGFSGLWFGLLSAQVACAVSILYVVLVRTDWEAEALKAEKLTMVEMGSCNGLRNEKDEESKGLLGNANGNNKDDIC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g02269 501 CDD MATE_eukaryotic 23 462 IPR045069 GO:0042910|GO:1990961
Pumo6g02269 501 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 456 - -
Pumo6g02269 501 NCBIfam MATE family efflux transporter 33 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo6g02269 501 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo6g02269 501 Pfam MatE 256 417 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g02269 Pumo-Chr6 43320810 43326282 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g02269 K03327 - gmx:100794753 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02269 6 43320810 43326282 Pumo6g02269 6 43320810 43326282 ECH