Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01745 ATGGGGTTATACAAGGTTTCATTTTCCATCTTCTGTGTCTTGGTCCTAGCCATTATGGCTCATTCTGGCCATGCCCAAAACTCCCAAGCAGACTTCCTCAATGCCCACAACACTGCAAGGTCACAGGTGGGTGTTCCACCTCTCATATGGGACAATAATTTAGCTGCTTACGCTCAAAATTACGCTAATCAACGTAAACGTGATTGCCAACTTATACACTCACGTGGACCTTACGGTGAGAACATCGGAAACAGCAGCGGCGACCGGAGTGGTGTCGACACAGTTAGGGCATGGGTGAACGAGAAGGCCAACTATGATTACAACTCCAATTCCTGCTCTAGTGTTTGTGGGCACTATACGCAGGTGGTTTGGAGAAACTCACTCCGTGTTGGGTGTGCCAAAGTAAGGTGTGACAATGGTGGCACGTTCATTATTTGCTGCTACGATCCCCGTGGGAACATTCGTGGGCAAAGACCTTATTAA 483 0.4803 MGLYKVSFSIFCVLVLAIMAHSGHAQNSQADFLNAHNTARSQVGVPPLIWDNNLAAYAQNYANQRKRDCQLIHSRGPYGENIGNSSGDRSGVDTVRAWVNEKANYDYNSNSCSSVCGHYTQVVWRNSLRVGCAKVRCDNGGTFIICCYDPRGNIRGQRPY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01745 160 CDD CAP_PR-1 29 160 - -
Pumo6g01745 160 ProSitePatterns CRISP family signature 1. 117 127 IPR018244 GO:0005576
Pumo6g01745 160 SUPERFAMILY PR-1-like 18 160 IPR035940 -
Pumo6g01745 160 Gene3D CAP 22 160 IPR035940 -
Pumo6g01745 160 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 157 IPR001283 -
Pumo6g01745 160 SMART SCP_3 27 156 IPR014044 -
Pumo6g01745 160 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Pumo6g01745 160 PRINTS Allergen V5/Tpx-1 family signature 143 156 IPR001283 -
Pumo6g01745 160 PRINTS Allergen V5/Tpx-1 family signature 116 132 IPR001283 -
Pumo6g01745 160 PRINTS Allergen V5/Tpx-1 family signature 94 107 IPR001283 -
Pumo6g01745 160 Pfam Cysteine-rich secretory protein family 33 148 IPR014044 -
Pumo6g01745 160 FunFam Putative pathogenesis-related protein 1 26 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01745 Pumo-Chr6 26363547 26364029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01745 K13449 - qsu:112017594 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01745 6 26363547 26364029 Pumo6g01745 6 26363547 26364029 ECH