Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01739 ATGGCGGTGGAGTACACATGCTGCTCAACGGAGTTCTTCGTCCACATACTCTTGATCGTGCTGCTGGTGCTCTTCGCGGGCCTCATGTCGGGCCTCACCTTGGGCCTCATGTCGCTCAGCCTCGTTGATCTTGAGGTTCTCGCTAAGTCTGGTACTCCTCAGGATCGTAAACACGCTGAGAAGATATTGCCAGTTGTCAAAAACCAACATTTATTGCTTTGTAGTCTGCTAATTTGCAATGCTGCAGCCATGGAGGCACTCCCTATTTTTCTTGACAGTCTTGTTACTGCGTGGGGTGCTATCCTGATTTCGGTGACATTAATTCTTTTGTTCGGTGAGATTATACCCCAATCAGTTTGTTCTCGGTATGGTTTGGCTATTGGTGCATCAGTGGCTCCCTTTGTCCGTGTGCTTGTATGCATATGTTTTCCAGTTGCCTTTCCAATTAGCAAGTTGTTGGATTTTTTGCTGGGCCATCGACATGAAGCCCTATTCCGTAGAGCTGAGTTGAAAACACTCGTAAATTTGCATGGTAATGAGGCTGGAAAAGGGGGGGAACTGACACATGATGAAACAACGATCATTGCTGGGGCACTTGAACTCAGTGAGAAGACAGCGAGTGATGCCATGACTCCTATATCTGAAACATTTACCATTGATATTAATTCAAAGCTTGATAGGGAACTGATGAATGAAATATTGGAGAAAGGGCACAGCAGAGTCCCAGTCTATTATGAGCAGCCTGCAAGCATTATTGGACTTGTACTGGTCAAGAATTTATTGACAGTTCATCCAGAAGACGAAGCACCCGTGAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTGAATGAGTTCCAGAAGGGCCATAGCCACATGGCAGTTGTTGTGAGACAGTGTGACAAGACGAAGCAACAATCTTCCCAAAATAATGCAAATGACTCGGTGAGAGATGTTAAGGTGGATATCGATGGTGAAAAGCCTCCCAAAGAGAAACCTTTGAAACCCAAGATGCCACTCCATAAGTGGAAAAGCTTTCCAAATACAAACAAGTCAAATAGGGGTTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTTTGGAGATGGATGGTACTCCCCTTCCAAAGCTCCCTGAAGAAGAAGCTGTTGGAATTATCACAATGGAAGATGTCATTGAAGAACTTTTACAGGAGGAGATCTTTGATGAGACAGATCATCATTTTGAAGACTCGTGA 1272 0.4434 MAVEYTCCSTEFFVHILLIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAEKILPVVKNQHLLLCSLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVAPFVRVLVCICFPVAFPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFTIDINSKLDRELMNEILEKGHSRVPVYYEQPASIIGLVLVKNLLTVHPEDEAPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQQSSQNNANDSVRDVKVDIDGEKPPKEKPLKPKMPLHKWKSFPNTNKSNRGSRSRKWSKNMYSDILEMDGTPLPKLPEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01739 423 MobiDBLite consensus disorder prediction 311 325 - -
Pumo6g01739 423 MobiDBLite consensus disorder prediction 311 369 - -
Pumo6g01739 423 FunFam DUF21 domain-containing protein 189 324 - -
Pumo6g01739 423 SUPERFAMILY CBS-domain pair 194 409 IPR046342 -
Pumo6g01739 423 Gene3D - 378 415 IPR046342 -
Pumo6g01739 423 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Pumo6g01739 423 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Pumo6g01739 423 Gene3D - 191 325 IPR046342 -
Pumo6g01739 423 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Pumo6g01739 423 MobiDBLite consensus disorder prediction 354 369 - -
Pumo6g01739 423 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Pumo6g01739 423 PANTHER METAL TRANSPORTER CNNM 3 420 IPR045095 GO:0010960
Pumo6g01739 423 MobiDBLite consensus disorder prediction 326 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01739 Pumo-Chr6 26195340 26200860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01739 K16302 - gmx:100801937 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01739 6 26195340 26200860 Pumo6g01739 6 26195340 26200860 ECH
Pumo6g01739 6 26195340 26200860 Pumo2g00981 2 14904248 14907456 PCT