Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01371 ATGCATTTTATAACTTGTTTTCTTTACTCTTTTTTTCATATAGAGTGGTTGCAGATGGCTCCTTTTGCTTTTGCAACTTTGCCTTCTTCTCACATCTGTCGCCTCCCAAAGCCCACAAACTTGAAGCTTCCAATTCGCTGCTCCACAGCTGCTTCTTCTCCTTCTTCGGTTTCCACTCGATCAAAAGCTGCTGACTTTGATTTGAAGACATATTGGGCTTCCCTAATGGTGCAGATCAATCAGAAGCTGGATGAAGCTATTCCAGTTCAGTTTCCTCCGCAAATATACGAAGCTATGAGGTATTCAGTCCTTGCCAAAGGTGCCAAGCGAGCCCCGCCTGTTATGTGCATCTCTGCTTGTGAACTCTTTGGGGGCAACCGCGTTGCTGCCTTCCCCACTGCCTGTGCCCTTGAAATGGTTCATGCGGCTTCATTGATACACGATGATCTTCCCTGCATGGATGACTCCCCCTCACGCCGTGGTCAGCCTTCAAACCATACCATCTATGGTGTAGACATGGCAATTCTTGCGGGTGATGCACTGTTTCCCCTTGGATTTCGACACATTGTTTCACAGACTCCATCTGATCTTGTGCCTGAGCCCAACCTCCTTCGCGTGATTGCTGAGATAGCCCGCTCTGTAGGCTCCACTGGAATGGCTGCAGGGCAGTTCCTGGACCTTGAAGGAGAACCCAATGCAGTTGGATTTATAGAAGAGAAAAAGTTTGGTGAAATGGGGGAGTGTTCTGCAGTTTGTGGAGGATTGTTGGCTGGAGCTAAAGATGATGAGATAGAGAGACTGAGGAGGTATGGGAGAGCTGTTGGGGTATTGTATTCAGTTGTCGATGAAATTCTGGAAGAGAGATTGAAAGCTGAGGGAGGTGGTGACAGGAAAGACAAGGGGAAGAGTTATGCAGAGGTTTATGGAGTCGTAAAGGCAATAGAAAAAGCTGAAGAGCTTAGAGCAAAGGCTAAGGAAGAATTGGATGGATTTGATAAGTATGGGGAGCGAGTCTTTCCTCTCTACAGTTTTGTGGATTATGCATTTGATAGAAGTTTCACTGTTGATGATGCCAGTGGATAA 1083 0.4663 MHFITCFLYSFFHIEWLQMAPFAFATLPSSHICRLPKPTNLKLPIRCSTAASSPSSVSTRSKAADFDLKTYWASLMVQINQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGNRVAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLVPEPNLLRVIAEIARSVGSTGMAAGQFLDLEGEPNAVGFIEEKKFGEMGECSAVCGGLLAGAKDDEIERLRRYGRAVGVLYSVVDEILEERLKAEGGGDRKDKGKSYAEVYGVVKAIEKAEELRAKAKEELDGFDKYGERVFPLYSFVDYAFDRSFTVDDASG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01371 360 Coils Coil 314 334 - -
Pumo6g01371 360 SUPERFAMILY Terpenoid synthases 69 332 IPR008949 -
Pumo6g01371 360 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 31 351 - -
Pumo6g01371 360 SFLD Isoprenoid Synthase Type I 96 341 - -
Pumo6g01371 360 CDD Trans_IPPS_HT 92 351 IPR000092 GO:0008299
Pumo6g01371 360 ProSitePatterns Polyprenyl synthases signature 1. 145 161 IPR033749 -
Pumo6g01371 360 FunFam Geranylgeranyl diphosphate synthase 65 353 - -
Pumo6g01371 360 Pfam Polyprenyl synthetase 94 288 IPR000092 GO:0008299
Pumo6g01371 360 Gene3D Farnesyl Diphosphate Synthase 65 360 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01371 Pumo-Chr6 18461129 18463721 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01371 K13789 - gmx:100788186 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01371 6 18461129 18463721 Pumo6g01371 6 18461129 18463721 ECH