Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01289 ATGGCGTTGAATTTCTCGCATCGACCGATTTTTGCTGAGGATAATTTGGTTTCGCCGATGAGGATGGGGATTCCAGAGAAGAGTGGTGTTGAGAATTGCTTTGATTATGGGAGAGATAGGGGTGGTGGTGGTGGTGGTGGTGCGAGTCACGATGACATTCTCGATCTTTTGCCTTCGGATCCCTTCGGGATGGACATCAGCACCACCTTCACGGCCATCACTGGGTGGCTCGAGGATTTGGAGGTTGATTATGGTGGGTACGGAAGGGATGAGCTTGGGGCGAGTGATAACAATTACCAGCTTTTTGCTGGGTTGAATTTCATTTGGAACAATGCTATGAGGTTCCATGCGTGTGTTGAGGAGAAGAAGGGGTTTGGCGAGTGTTGTTCTGTTAATGATGGGGCTGCTGCTGCTGCATCTAGCAATTTTGGGTTTGGATCTGCTAATGATGGCGATGTGTCGGGTTTGCCTGCTGCTAGCGGGTCGGGTGATGTTGTGAGACGGGGTGGAGGAGGAGGAGGAGGAGGTGGGGGTGATATTGTGAGTCAGGGTGGAGGAGGAGGTGGAGGTGATGAGCTTGCTCCTCACCCGGCCTTGAGTTTTTCTCTTGGCTATCTGGGTTTGTCTGATCTGCTTGTTGTTGAAAGAGTGTGTAAATCTTTGCATTCCACAGTTCATGGTGATCCGCTTTTGTGGAGGAGTATCCATGTGGATCAGCCTTTGAACGAGAGGATTACCGATGATGTTCTTCTGCAGTTGACCAACAGGGCTCAAGGTAATCTCCAGTGCTTGAGCCTTGTCGAGTGTACCAGGATAACCGATGATGGATTGAAGCGTGTTCTTGAAGGCAATCCCAAGTTAATCAAGTTGAGTGTTCCAGGATGTACAAGACTCAGTATTGAGGGCATTGTGGGTATTTTAAAAGCTTACAACTCTATGGGTACCCAAGGGGTGAAGCATTTACACATAGGTGGTCTTTATGGTGTTACACAAAAGCACTTTGAAGAGCTGAGGTTCTTGTTGGGGGCTGATAGTCAGCTGCTCCAGCACTATCACAAACCACACTTTTATCGCAGGGGATTCTTGTACCTGTCCTGTGAAGATGATCGAGCCATAGACATTGAAGTTTGTCCACGATGTCAGAATTTGAGGCTTGTATATGATTGTCCGGCGGAGAGTTGTCAAGGGGTGGGGGGCACTACTCAAGTGTGCAGGGCATGCATTCTATGCATACCCAGGTGTAGTCAGTGTGGTCGCTGCATCAATGACAGTGAATATGAGGAAACATTTTGTCTGGAATTGCTTTGCTCTTCTTGCTCTAAGCAGCTGGTCAAATGTTCAGAAAGAGGAGACAGAAATATTGGGTCAGCTAAATCAGTTGTTATTCGTGAGCAAAGCTAG 1401 0.4804 MALNFSHRPIFAEDNLVSPMRMGIPEKSGVENCFDYGRDRGGGGGGGASHDDILDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYGRDELGASDNNYQLFAGLNFIWNNAMRFHACVEEKKGFGECCSVNDGAAAAASSNFGFGSANDGDVSGLPAASGSGDVVRRGGGGGGGGGGDIVSQGGGGGGGDELAPHPALSFSLGYLGLSDLLVVERVCKSLHSTVHGDPLLWRSIHVDQPLNERITDDVLLQLTNRAQGNLQCLSLVECTRITDDGLKRVLEGNPKLIKLSVPGCTRLSIEGIVGILKAYNSMGTQGVKHLHIGGLYGVTQKHFEELRFLLGADSQLLQHYHKPHFYRRGFLYLSCEDDRAIDIEVCPRCQNLRLVYDCPAESCQGVGGTTQVCRACILCIPRCSQCGRCINDSEYEETFCLELLCSSCSKQLVKCSERGDRNIGSAKSVVIREQS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01289 466 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 99 431 - -
Pumo6g01289 466 SUPERFAMILY RNI-like 243 331 - -
Pumo6g01289 466 Gene3D Ribonuclease Inhibitor 199 385 IPR032675 -
Pumo6g01289 466 MobiDBLite consensus disorder prediction 164 190 - -
Pumo6g01289 466 SUPERFAMILY F-box domain 203 236 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01289 Pumo-Chr6 17121849 17125929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01289 - - gmx:100807460 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01289 6 17121849 17125929 Pumo6g01289 6 17121849 17125929 ECH