Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01243 ATGACCGGAAGTGAAGGAAGAAGCGCTCGCAGCGGAGTGAGATCGTCCTCCGAAAGGTTGAATCGCCGCAGAGATAGAAGCAAATACGGAAACTCCGTTCCAATGTTCAGCAATGGCTATGGCTATATCAAAGTTATGCTCGGTGGTATCGTCTTGTTTTTGAACCATTATTGCGTCGCCAATTCAGCCGCAGAACGTCGTCTTCCTCGCGTTGTGACGCCGTTTCCCGCGCCAAAGATAACGGACCTTCCTCAGTTTGAAGGTGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGTCCTCAGCTCTATCTTGGAATTCGTGCCAGGACTCCAAAATCTTTGATGGCTGGATTAATGTGGATTGTTGTGAAGGACGGCAGCTATCACTTGCGGCATGTTTGCAAACACGAGGATAACCTTAGTACTTATGGTTGGACAAAGCACAATGGACGTGATTTTGGACATCAAGTGCTGGTTGACCATGGCATGACCATGACTACTGGATTTTTAAAATCAAAAGAGGAAGGCAGTGGTTATGGAGGGGATTGGGCAGTTCGAATTAATGTGCAAATTAATAAGTCCAAGTGGAGTGAGGAATTTGGGAGAGGTGCCCAGCTTTTTTTCTATTTGGCTGATGAAGGTGGTAATGCTCTAAATTTAAGTAGAGAAAACTTGAACATTCATGGGGATTCTTTGCTGGCATCTGGCTCTCGAGCGGACATTGGAGATTGGCAGCTACATTTAAAATCAACGGATGATTTGGAGCTGCATTATTCTGGATTTCACACTCCTCACTTTCACAATTTGTCCGATCTTGTTGAGGAAAATCTTGCATCACAAATAAGAAAGCATGCTCGACTGCTGCTATCTGACTCATCAGACGATTCTCCAAATGTATTAGTTTTTCAGATTATTGGTGGATATTCTTTCACAACAGATGTTATATTTATCTCTGGAACTGATTCAGAAAGTTCAAGAGTGGAAGAGCGTGTCAGTAGTCTTACAGGAACCTCACTGTCCAATCAACTGAAATATAAAGAACAAGCATTTGATGAGAAGTTTGAGAAAATTTTCAATTTAGCTGAGAAGGTGGATTCAGAATCCATATCTGTTGGTAAGGCAGCTGTTGGAAACTTATTAGGTGGCATTGGCTACTTCTATGGCCAGTCAAAAATTGCTGTTTCAAGAATCTTTAATCTTAATGAGCATGTTAATTATATATCATATTGGCCTGCTGAGCTTTACACAGCTGTACCATGTCGACCTTCCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTATAATCTGGCGTTGGGATATCCATATTTCATTGGATATCATTGGACACTGGTTAGATTTGATGAATGCTGATGGATGGATACCACGTGAACAAATTCTTGGGGCTGAAGCACTAAGTCGGGTCCCGGAGGAATATGTTCCTCAGCATCCAACAAATGGAAATCCTCCAACTCTGTTTTTAGCATTAAGTGATATAATTAATGGCTTGAAGAATAATGAGTTTACTGCAATGGATAAAACTGATATCTCTCTATTCCTGGAGCGTGCCTTTGTTCGATTAGAAGCATGGTTCCAATGGTTCAATACAACTCAGTCAGGGAAACAGATGAGCAGCTACTATTGGCATGGACGAAACAATAGGACTATATATGAATTAAATCCCAAGACACTGTCCTCTGGATTTGATGATTATCCACGTGCTTCACACCCAAGTGCAGATGAACGCCACGTGGATCTTAGATGTTGGATGTTACTTGCAGCGGATTGTTTGCATTCCATTGAAGAGTTGTTGGATAAGGAAACTAAACCTGGCAAGAATTATGGTTCTACTGCTAAATTGCTATCAGATGTCGAGTTACTGAACCAGATGCATTTTGATGATGCATATGGTGCTTATTTTGATTTTGGAAATCATACAGAAAAGGTTCAACTTAAATGGAAAGAAGTGGAGATAGGACACAATCATACTGCTCGCCAGCTTGTCAGAGATGTTTTAGAGAGGCCCGTATTGAGATTGGTTCCTCACATTGGTTATGTTAGCCTATTCCCATTCATGGGGAAGATCATTTCATCTGGAAAATGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCACAGCCTCTTTTGGACTGACTATGGACTACGATCGCTTGCCACGACAAGTTCCTTGTACATGAAGTTCAACTCAGAGCTTGAGGGCCCATATTGGAGAGGTCAAATTTGGATAAACATGAATTACAGAGTTCTTTCAGCGCTCCACCATTACTCCGAAGGTATTATGAACAGGCCTAGGCAAAATATTTGCAAATATTTCACTTCATTCATACCTTTTTGTGAATGTTGTAGAGAATGGACCATATCAGGACAGAGCTAA 2409 0.413 MTGSEGRSARSGVRSSSERLNRRRDRSKYGNSVPMFSNGYGYIKVMLGGIVLFLNHYCVANSAAERRLPRVVTPFPAPKITDLPQFEGEHKESLYWGTYRPQLYLGIRARTPKSLMAGLMWIVVKDGSYHLRHVCKHEDNLSTYGWTKHNGRDFGHQVLVDHGMTMTTGFLKSKEEGSGYGGDWAVRINVQINKSKWSEEFGRGAQLFFYLADEGGNALNLSRENLNIHGDSLLASGSRADIGDWQLHLKSTDDLELHYSGFHTPHFHNLSDLVEENLASQIRKHARLLLSDSSDDSPNVLVFQIIGGYSFTTDVIFISGTDSESSRVEERVSSLTGTSLSNQLKYKEQAFDEKFEKIFNLAEKVDSESISVGKAAVGNLLGGIGYFYGQSKIAVSRIFNLNEHVNYISYWPAELYTAVPCRPSFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLMNADGWIPREQILGAEALSRVPEEYVPQHPTNGNPPTLFLALSDIINGLKNNEFTAMDKTDISLFLERAFVRLEAWFQWFNTTQSGKQMSSYYWHGRNNRTIYELNPKTLSSGFDDYPRASHPSADERHVDLRCWMLLAADCLHSIEELLDKETKPGKNYGSTAKLLSDVELLNQMHFDDAYGAYFDFGNHTEKVQLKWKEVEIGHNHTARQLVRDVLERPVLRLVPHIGYVSLFPFMGKIISSGKWILEKQLELISNHSLFWTDYGLRSLATTSSLYMKFNSELEGPYWRGQIWINMNYRVLSALHHYSEGIMNRPRQNICKYFTSFIPFCECCREWTISGQS 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01243 802 Gene3D - 81 362 IPR038518 -
Pumo6g01243 802 MobiDBLite consensus disorder prediction 1 15 - -
Pumo6g01243 802 Pfam Glycosyl hydrolase family 63 C-terminal domain 336 769 IPR031335 -
Pumo6g01243 802 SUPERFAMILY Six-hairpin glycosidases 343 768 IPR008928 GO:0005975
Pumo6g01243 802 Pfam Glycosyl hydrolase family 63 N-terminal domain 93 256 IPR031631 -
Pumo6g01243 802 Gene3D - 363 795 IPR012341 GO:0005975
Pumo6g01243 802 MobiDBLite consensus disorder prediction 1 25 - -
Pumo6g01243 802 FunFam Mannosyl-oligosaccharide glucosidase GCS1 81 362 - -
Pumo6g01243 802 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 54 770 IPR004888 GO:0004573|GO:0009311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01243 Pumo-Chr6 16492332 16507618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01243 65 768 Glycoside Hydrolase AT1G24320 58.440 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01243 K01228 - gmx:100795161 1436.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01243 6 16492332 16507618 Pumo6g01243 6 16492332 16507618 ECH