Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01242 ATGACCGGAAGTGGAAGAAGTGCCGTTCGGAGCAGAGCGAGATCCCTCTCCGACGCCGACGCCGATTCTCTTCGACAAAAGAGGCCTCCGTTGAATCGCCACAGAGAGAGAAGCAAATACGGAAGCTCCATTCCGATATTCAGCAATGCCAATCTCAAAGTGCTGCTCGGTATCTGCTTCGTGGCGTTCTTCGTCATCTTGTTTATGATCCATCATCTATTGAATTCCGCCACGGAACCGAAGCTTCCTCGCGCCGTTACGCCATTTTCCGCGCCGAAGATAATGGACCTTCCTCAGTTTGAAGGTGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGGCCTCACGTGTATCTCGGAATTCGCGCCAGGACTCCAAAATCTTTGATGGCTGGATTAATGTGGATTGGTGTGAAGGACGGCAGATATCACTTGCGGCATGTTTGCAGACATGAGGATGACCTAAGTACTTATGGTTGGACAAGGCACAATGGACGTGATTTTGGACATCAAGTGCTGGTTGACCACGGCATGACCTTGACTACTGGGTTTTTAAAATCAAAAGAGGAAGGCAGTGGTTATGGAGGGGATTGGGCAGTTCGAATTAATGTGCAAGTTGATAAGTCCAAGTGGAATGAGGAATTTGGGAGAAGTGCCCAGCTCTTTTTCTATTTGGCTGATGAAGCTGGTAATGCTCTAGATGTAAGTAGAGAAAACTTGAACATTCATGAGGATTCTTTGCTTGCATCTGGCTCTCGAGCAGATATTGGAGATTGGCAGCTACATTTAAAATCAACGGATGATTTGGCACTGCATTATGCCGGATTTCGCACACCTCACTTTCACAATTTGTCTGATCTTGTAGAGGAAAATCTTGCATCACAAATACAAAAGCATGCTCGACTGCAGCTATCTGACTCATTAGATGATTCTCCAAATGTGTTAGTTTTTCAGATTACTGGTGGATTTCCTTTCACAACAGATATTGCACTAATCTCTGGAACTGATTTGGAAACTTCTAGTGAAGAAGAGCGTGTCAGTATGCTTACAGGTACCTCACTGTCCGATAAACTGAAATATAAAGAACAAGAATTTGATGAGAAGTTTGAGAAAATTTTCAATTTGGCCGGGAAGGTGGATTCCGAATCCTTATCTGTTGGTAAGGCTGCTGTTGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGCCAGTCAAAAATTGCACTTTCAAGAATCCTTAATCTTAGAGAACATGTCAATTATGTATCGTATTGGTCTGCTGAGCTTTACACAGCTGTACCAAGTCGATCTTTCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTCATAATCTGGCGTTGGGATATTCATATTTCATTGGATATCATTGGACATTGGTTAGATTTGATGAATGTTGATGGATGGATACCACGTGAACAAATTCTGGGGGCTGAAGCACTGAGTCGGGTCCCAGAGGAATTTGTTCCTCAGCATCCAACAAATGGAAATCCTCCGACTCTGTTTTTAGCATTAAATGATATAATTAATGGCTTGAAGAATAATGAGTTTACTGCAATGGATAGAAGTGAGATCTCTCTATTCCTGGAACGTGCCTTTGTTCGATTGGAAGCATGGTTCCATTGGTTCAATACAACTCAGTCAGGGAAACAGATGGGCAGCTACTATTGGCATGGACGGGACAATAGGACAATGCGTGAAATAAATCCCAAGACACTGTCCTCTGGATTGGATGATTATCCACGAGCTTCACACCCAAGTGAAGATGAACGCCACTTGGATCTTAGATGTTGGATGTTACTTGCAGCAGACTGTATGCATTCCATTCAAGAGTTGTTGGATATGGAAAGCAAACCTGGCATGGATTATGGTTCTACTGCTAAATTGCTATTGGACTTTGAGTTACTAAACCAGATGCATTTTGATGATGCATACGGTGCTTACTTTGATTTTGGAAATCATACAGAGAAGGTTCAACTTAAATGGAAAGAACTGGAAGCAGGACAATATGCTACTCGCCAACTTCTCCGGGATGTTATGGAAATGCCTGTATTGAGATTGGTTCCTCACATTGGTTATGTTAGTTTATTCCCGTTCATGGGGAGGATCATTCCATCTGGATCATGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCTTGTGGACCAACTATGGACTACGTTCTCTTGCCAAAACAAGTTCCTTGTACATGAAACACAACACAGAGCATGACCCTCCATACTGGAGAGGTCCAGTTTGGATAAACATGAATTACAGAATTCTTTCAGCGCTTCACCATTACTCCAAAGAGAATGGGCCATACCAGGACAAAGCTAAAGCTATCTACGAAGAATTGAGAAGCAATTTAATTAGAAATCTAGTGCGCAATTATCAACAGACTGGATTTTTGTGGGAACAGTACGAACAGACTAAGGGTAAGGGAAAAGGGACACATCCATTTACTGGTTGGACATCACTTATAGTATTAATCATGGCAGAAGCATATGGCAATATTTAG 2556 0.4257 MTGSGRSAVRSRARSLSDADADSLRQKRPPLNRHRERSKYGSSIPIFSNANLKVLLGICFVAFFVILFMIHHLLNSATEPKLPRAVTPFSAPKIMDLPQFEGEHKESLYWGTYRPHVYLGIRARTPKSLMAGLMWIGVKDGRYHLRHVCRHEDDLSTYGWTRHNGRDFGHQVLVDHGMTLTTGFLKSKEEGSGYGGDWAVRINVQVDKSKWNEEFGRSAQLFFYLADEAGNALDVSRENLNIHEDSLLASGSRADIGDWQLHLKSTDDLALHYAGFRTPHFHNLSDLVEENLASQIQKHARLQLSDSLDDSPNVLVFQITGGFPFTTDIALISGTDLETSSEEERVSMLTGTSLSDKLKYKEQEFDEKFEKIFNLAGKVDSESLSVGKAAVGNLLGGIGYFYGQSKIALSRILNLREHVNYVSYWSAELYTAVPSRSFFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLMNVDGWIPREQILGAEALSRVPEEFVPQHPTNGNPPTLFLALNDIINGLKNNEFTAMDRSEISLFLERAFVRLEAWFHWFNTTQSGKQMGSYYWHGRDNRTMREINPKTLSSGLDDYPRASHPSEDERHLDLRCWMLLAADCMHSIQELLDMESKPGMDYGSTAKLLLDFELLNQMHFDDAYGAYFDFGNHTEKVQLKWKELEAGQYATRQLLRDVMEMPVLRLVPHIGYVSLFPFMGRIIPSGSWILEKQLELISNRSLLWTNYGLRSLAKTSSLYMKHNTEHDPPYWRGPVWINMNYRILSALHHYSKENGPYQDKAKAIYEELRSNLIRNLVRNYQQTGFLWEQYEQTKGKGKGTHPFTGWTSLIVLIMAEAYGNI 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01242 851 FunFam mannosyl-oligosaccharide glucosidase 377 848 - -
Pumo6g01242 851 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 58 848 IPR004888 GO:0004573|GO:0009311
Pumo6g01242 851 Pfam Glycosyl hydrolase family 63 N-terminal domain 107 267 IPR031631 -
Pumo6g01242 851 Gene3D - 95 376 IPR038518 -
Pumo6g01242 851 MobiDBLite consensus disorder prediction 1 36 - -
Pumo6g01242 851 SUPERFAMILY Six-hairpin glycosidases 352 849 IPR008928 GO:0005975
Pumo6g01242 851 Pfam Glycosyl hydrolase family 63 C-terminal domain 350 846 IPR031335 -
Pumo6g01242 851 FunFam Mannosyl-oligosaccharide glucosidase GCS1 95 376 - -
Pumo6g01242 851 Gene3D - 377 850 IPR012341 GO:0005975
Pumo6g01242 851 MobiDBLite consensus disorder prediction 13 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01242 Pumo-Chr6 16478727 16487111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g01242 79 848 Glycoside Hydrolase AT1G24320 58.938 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01242 K01228 - gmx:100795691 1652.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01242 6 16478727 16487111 Pumo6g01242 6 16478727 16487111 ECH