Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01221 ATGGGTGCAGCGGGGCAGAGTGTGGGGGTGAGGTGGAGGGAGGGGCGGTGGGAGGAGGAAGGGAGAGGGGTGGGGCAAAGGAGAGCTTGGGAGAGGAAGAGAGAGAAAGAGGAAGAAGCCATGGTGACACCTCAGCAGTCCCTCTCGGAGATCACAATAACCTTCGATGTTCTCCAGGGCCTCCACCGGCCCGCGAACTTCCTCGTCTTTGGGCTGGGCCGCGACTCCCTCATGTGGGCCAGCCTCAACCCGCACGGCACCACGCTCTTCCTCGAGGAGGACCCCAAGTGGTTCCAGACGGTTACAAAAGACGCGCCGTACCTCCGGGCCCACACCGTCCGCTACCGCACGCAGCTCCGCGAGGCAGACACCCTCCTCTCCTCGTACCGCTCCGAACCCGCGTGCTCGCCGGCCACCGCCACGCTCCGCGGCAACGAGCGCTGCAAGCTCGCGCTCCACAACCTCCCCGACGAGGTGTATAATAAAGAGTGGGATTTGATCATGATCGACGCGCCGAAGGGGTACTTCGCGGAGGCGCCGGGGCGCATGGCGGCGATATTCTCGGCGGCGGTTATGGCGAGGAATAGGAAGGGATCCGGTGTGACGCATGTGTTCCTGCACGATGTGGATCGGAAGGTGGAGAAGGTTTACGCGGAAGAGTTTCTCTGTAGGAAGCACTTGGTCAAAGGCGTTGGGAGGCTCTGGCACTTCGAGATTCCTCCCAAGGGTAATCAAACTCATGATGACACGCGTTTCTGTTAG 762 0.6168 MGAAGQSVGVRWREGRWEEEGRGVGQRRAWERKREKEEEAMVTPQQSLSEITITFDVLQGLHRPANFLVFGLGRDSLMWASLNPHGTTLFLEEDPKWFQTVTKDAPYLRAHTVRYRTQLREADTLLSSYRSEPACSPATATLRGNERCKLALHNLPDEVYNKEWDLIMIDAPKGYFAEAPGRMAAIFSAAVMARNRKGSGVTHVFLHDVDRKVEKVYAEEFLCRKHLVKGVGRLWHFEIPPKGNQTHDDTRFC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01221 253 Gene3D Vaccinia Virus protein VP39 32 250 IPR029063 -
Pumo6g01221 253 Pfam Polysaccharide biosynthesis 50 237 - -
Pumo6g01221 253 NCBIfam TIGR01627 domain 42 253 IPR006514 GO:0045492
Pumo6g01221 253 PANTHER OS11G0490100 PROTEIN 41 253 IPR006514 GO:0045492
Pumo6g01221 253 FunFam Putative methyltransferase 38 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01221 Pumo-Chr6 16164969 16168362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01221 - - gmx:100820087 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01221 6 16164969 16168362 Pumo6g01221 6 16164969 16168362 ECH
Pumo1g00460 1 6245191 6246034 Pumo6g01221 6 16164969 16168362 PCT