Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g01203 ATGGCTGTAGGAGGTCAAGATGTAATCTGTGTCAAACAAAAACATTCTTCAAAGATTCCTCCTGGTGATCTCAGAATACATTTAGAGGATCTCGGAGATTTTTTATTCTCAGACGTCAGAAGCCCTTCTTTACTACAGAGGAAGACAGCAGATGGCAAACAGAAGGTCCCTGAGGTCTTTAACCGTGTTATGCAATCAAACACAATGCAGTTTACTAGTATTTCAGAAACATCAAGCAAGGATGGCCTCACTATTATTTGCTCAAAAAGAGGAGGAGATATGTTCAAGCACAGTCACTCAAATTGGCTTCAGACAGTGCCATCTAACCCTGAAGCAATCCTCTTCAAGTTTGTTCCTATTTCCTCACTTCTCACAGGAATTCCTGGAAGTGGATATCTTAGTCATGCAATCAATCTGTATCTACGCTATAAGCCTTCTCCCGAAGATTTACAATACTTTTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTGCGAGCTGCCTCTTAGGCATCAGCGTAGAAAGACTGCTTCCCCTTCCCTGCAATTTAGTTTCATGGGTCCAAAGCTTCATATCATCTCTACACAGGTGGTAAGTGAACAAAAACCTGTCGTTGGCATGCGCTTGTACTTGGAGGGCAGGAAATGTGACAGACTTGCTTTACATATAAATCATCTTTCAAGCCTCCCAAATAAAATGATCCTCTCTTCAGGAACCTCAACCTCGAGTACCCCAACGATGTGGCGAGGATCTGATGATAATGAATCCAGTGATCAATTTCTGGAACGAATCAGATGGAAGAGATTCTCAAATGTGTGCACAGCAGTGGTTAAGCATGACCCTAACTGGTTGAATAGTTCTGGAGGTGTTTATATTGTAACAGGTGCACAACTCCTTAGCAAAGGGAGCTGGCCAAGGAATGTTCTTCATCTGCACCTTCTCTTCACTCATATACCCAATTGCAGTATACGGAAGTCAGAGTGGGCTGGTGCACCAGAGGCTTCAAGAAAATCATCTTTTCTCACAAATTTGAGCACAACATTTTCATTCACACAGCACAGCACCACTGGTCCTCCAAAACAGGCTCCAACTGCACTTAACTCCGGAGTTTATCCGGACGGTCCACCTGTGCCAGTTCGCTCCGGTAAACTACTTAAATACGTGGAGACAGCCGAGGTTGTGCGAGGCCCACATGATGCTCCTGGCCATTGGTTGGTAACAGCTGCTAAGCTTGTGACTGATGGTGGTAAGATTGGATTACAAGTGAAGTTTGCATTGTTAGATTATTGGTGA 1299 0.438 MAVGGQDVICVKQKHSSKIPPGDLRIHLEDLGDFLFSDVRSPSLLQRKTADGKQKVPEVFNRVMQSNTMQFTSISETSSKDGLTIICSKRGGDMFKHSHSNWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPEDLQYFLEFQIPRQWAPMFCELPLRHQRRKTASPSLQFSFMGPKLHIISTQVVSEQKPVVGMRLYLEGRKCDRLALHINHLSSLPNKMILSSGTSTSSTPTMWRGSDDNESSDQFLERIRWKRFSNVCTAVVKHDPNWLNSSGGVYIVTGAQLLSKGSWPRNVLHLHLLFTHIPNCSIRKSEWAGAPEASRKSSFLTNLSTTFSFTQHSTTGPPKQAPTALNSGVYPDGPPVPVRSGKLLKYVETAEVVRGPHDAPGHWLVTAAKLVTDGGKIGLQVKFALLDYW 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g01203 432 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 154 IPR020864 -
Pumo6g01203 432 MobiDBLite consensus disorder prediction 352 374 - -
Pumo6g01203 432 Pfam MAC/Perforin domain 59 140 IPR020864 -
Pumo6g01203 432 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 1 431 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g01203 Pumo-Chr6 15900561 15906455 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g01203 - - gmx:100781070 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01203 6 15900561 15906455 Pumo6g01203 6 15900561 15906455 ECH
Pumo1g00477 1 6368822 6373614 Pumo6g01203 6 15900561 15906455 PCT