Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00886 ATGTTTGAGACTTTTAACGTGCCTGGACTTTACATTGCTGTGAATTCCGTGCTTGCTCTTGCAGCTGGATACACGACATCCAAGACTGGCTATGTTATTGGAAGTAGCATCAAATCGATTCCTATTGCTGGAAAGGATGTTACCCTTTTTGTTCAGCAGCTTATGCGGGAAAGAGGAGAGAATGTACCACCGGAAGACTCTTTTGAAGTGGCACGGAAAATGAAGGAAATGTATTGCTACACCTGCTCTGACATTGTGAAGGAATTTAATAAGCATGACAAAGAACCAGGCAAGTACATCAAGCATTGGAGAGGCATTAAACCAAAGACGGGGGCACCATATTCATGTGATATTGGCTATGAACGATTTCTTGGTCCTGAGATTTTCTTTAATCCTGAGATATATAGCAGTGACTTTACAACCCCTTTGCCAGTTGTAATAGACAAGTGCATTCAGTCTGCGCCAATTGACACAAGGAGATCATTATATAAGAATATAGTGTTGTCTGGAGGTTCAACCATGTTCAAGGATTTTCATAGGAGGTTGCAACGTGATCTTAAAAAAATAGTGGATGCTCGTGTCCTTTCATCTGAAGCACGCTTAAATGGGGAGATAAAATCACAGCCAGTGGAGGTAAATGTACTCAGCCATCCAATCCAGAGATTTGCAGTTTGGTTTGGAGGATCAGTACTTGCATCAACACCTGAATTTTTTACGGCTTGTCATACAAAGGCAGAATATGAGGAGTATGGAGCAAGCATTTGCCGCACAAATCCCGTTTTCAAGGGGATGTATTAA 798 0.416 MFETFNVPGLYIAVNSVLALAAGYTTSKTGYVIGSSIKSIPIAGKDVTLFVQQLMRERGENVPPEDSFEVARKMKEMYCYTCSDIVKEFNKHDKEPGKYIKHWRGIKPKTGAPYSCDIGYERFLGPEIFFNPEIYSSDFTTPLPVVIDKCIQSAPIDTRRSLYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLSSEARLNGEIKSQPVEVNVLSHPIQRFAVWFGGSVLASTPEFFTACHTKAEYEEYGASICRTNPVFKGMY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00886 265 SUPERFAMILY Actin-like ATPase domain 29 260 IPR043129 -
Pumo6g00886 265 FunFam Actin-related protein 3 (ARP3) 42 140 - -
Pumo6g00886 265 SMART actin_3 1 260 IPR004000 -
Pumo6g00886 265 FunFam Actin-related protein 3 224 251 - -
Pumo6g00886 265 Gene3D - 1 251 - -
Pumo6g00886 265 PANTHER ACTIN 1 252 IPR004000 -
Pumo6g00886 265 Gene3D Actin; Chain A, domain 4 42 140 - -
Pumo6g00886 265 Gene3D - 16 223 - -
Pumo6g00886 265 Pfam Actin 1 256 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00886 Pumo-Chr6 11018918 11022957 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00886 1 256 Miscellaneous Gene Families AT3G53750 29.779 7.78e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00886 K18584 - cpap:110817130 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00886 6 11018918 11022957 Pumo6g00886 6 11018918 11022957 ECH