Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00863 ATGGAAGTTATGGAGGCGGTGGGAGAAAAATGGATACAAATTGTGACGTGGGTTGTAATTTCAACAACATTAATGCGGAGTGGTGTCATCTATGGGAGTGGAAGTGAAAGCGAGTGCAGTTTTCCAGCGATCTTCAACTTGGGAGACTCGAATTCGGACACAGGCGGTCTCTCAGCAGCGTTCGGACAAGCTCCTCCTCCCAATGGAATCACTTTCTTCCACTCCCCTCACGGACGCTTCTCCGATGGTCGACTCATCATCGATTTTATAGCGGAGAGGTTGGGGTTGAGTTATCTCAGTGCTTACTTGGACTCGGTGGGGTCGAACTTCAGTCACGGAGCCAATTTCGCAACAGCCGGATCCACTGTCAGACCTCAGAACACAAGCGGATACAGTCCCATTTCCCTAGACGTTCAGTTTGTGCAGTTCTCTGATTTCAAAGCCAGATCCAAACTCGTTCGCCAACAAGGAGGGGTGTTTAAGGAATTATTGCCCAAGGAGGAGTATTTTTCTCAGGCTCTATATACATTTGATATTGGCCAAAATGATCTCACTGCTGGCTACAAACTTAACTTGACCACAGAACAAGTGAAGGCATATATACCAGATGTATTGGGCCAGTTCTCCAATGTCATAAAGGGTGTGTATGGGGAAGGTGGAAGGTCTTTTTGGATACACAACACAGGCCCATTGGGCTGTCTGCCATACATGCTGGATCGCTATCCCATGAAACCAGCCCAAATGGATGAGTTTGGGTGTGCCAAACCATTCAACGAGGTGGCCCAATATTTTAACCGTAAATTAAAAGAAGTCGTTGAGCAACTGAGGGAAGAATTGCCAGAGGCTGCAATCACCTATGTTGATGTGTATACGGTGAAGTACACCCTCATCAGCCATGCCCAAAAATACGGTTTTGAGCAGGGGGTGATAGCATGCTGTGGACACGGTGGGAAATACAACTTCAATAATACAGAGAGATGTGGAGCAACCAAGATGGTGAATGGGACAGAGATTGTGATAGCCAATTCGTGCAAAGATCCTAGTGTAAGGATTATTTGGGACGGAATCCATTATACCGAAGCTGCTAATAATTGGATCTTCCCACATATAGTCAATGGCTCCTTTTCAGATCCACCTAACTCTTTAAAAAGGGCTTGTTATGGTAATTCACCCATCCACTGCGATGATTAA 1191 0.4601 MEVMEAVGEKWIQIVTWVVISTTLMRSGVIYGSGSESECSFPAIFNLGDSNSDTGGLSAAFGQAPPPNGITFFHSPHGRFSDGRLIIDFIAERLGLSYLSAYLDSVGSNFSHGANFATAGSTVRPQNTSGYSPISLDVQFVQFSDFKARSKLVRQQGGVFKELLPKEEYFSQALYTFDIGQNDLTAGYKLNLTTEQVKAYIPDVLGQFSNVIKGVYGEGGRSFWIHNTGPLGCLPYMLDRYPMKPAQMDEFGCAKPFNEVAQYFNRKLKEVVEQLREELPEAAITYVDVYTVKYTLISHAQKYGFEQGVIACCGHGGKYNFNNTERCGATKMVNGTEIVIANSCKDPSVRIIWDGIHYTEAANNWIFPHIVNGSFSDPPNSLKRACYGNSPIHCDD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00863 396 Gene3D SGNH hydrolase 32 373 IPR036514 -
Pumo6g00863 396 SUPERFAMILY SGNH hydrolase 46 370 - -
Pumo6g00863 396 CDD SGNH_plant_lipase_like 42 374 IPR035669 -
Pumo6g00863 396 Coils Coil 265 285 - -
Pumo6g00863 396 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 28 378 - -
Pumo6g00863 396 Pfam GDSL-like Lipase/Acylhydrolase 44 367 IPR001087 GO:0016788
Pumo6g00863 396 FunFam GDSL esterase/lipase At1g09390 33 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00863 Pumo-Chr6 10818250 10820455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00863 42 377 Acyl Lipid Metabolism Gene Families AT4G10950 29.023 2.69e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00863 - - gmx:100803899 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00863 6 10818250 10820455 Pumo6g00863 6 10818250 10820455 ECH