Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00857 ATGTGGTGGATGATGGGCGAGACTGGAGGCAATTACTGTTCTAAGAAGAGCGATGATTTGTGCAGCAATGTTTGTGGTCAGGAATCAAGTCAAGTATCAGGCATGTCACGAATTCGCTGTATTCTGCGTGGTTTGGATGTGAAAACCTATATATTCATGTTTGCTGTTGTCCCAATGTGCGTCTTTGGATTCTATATACATGGGCAGAAGATCTCCTACTTTCTGCGGCCGCTATGGGAAAAAGCACCAAAGCCTTTCCATGTCATCCCTCATTACTATAACGAAAATGTCACCATGGAGAATCTCTGCAGACTTCATGGCTGGGGAGTCCGGGAGTACCCTAGGCGTGTTTATGATGCTGTGTTGTTTAGCAATGAGTTGGAAATACTAACCTTGCGCTGGAAAGAATTGTACCCTTACATAACTGAATTTGTTCTCCTTGAGTCAAATTCTACCTTCACCGGATTGCCTAAGCCTCTGGTTTTCAATATCAATAAGGAGCAGTTCAAATTTGTTGAGCCCCGGTTAACTTATGGAACAATTGGTGGAAGATTTAAGAAAGGAGAAAACCCATTTGTTGAGGAGGCGTATCAGCGTGTGGCGTTGGACCAGCTCCTCAAGATAGCTGGTATCACTGATGATGACTTGTTGATTATGTCTGATGTGGATGAGATACCAAGTGCTCACACTATTAACCTCCTGAGGTGGTGTGATGAAGTGCCCTCAATCCTTCATCTGCAGCTGAAAAATTATCTCTATTCATTTGAATTTCACGTGGATGATAAGAGCTGGAGGGCTTCAATTCACAGGTATCAGACTGGTAAGACGAGGTATGCACATTATCGCCAGTCTGATGACATATTGGCAGATGCTGGCTGGCATTGTAGCTTTTGCTTCCGTCGAATCAGCGATTTCATTTTCAAGATGAAAGCCTACAGCCATTATGACAGAGTCAGGTTCTCTCATTATTTAAATCCTGAAAGAATTCAGAGGGTAATCTGCAAAGGGGCCGATTTATTTGATATGCTGCCGGAGGAGTACACTTTCAAGGATATCATTGGTAAAATGGGACCAATACCCCATTCTTATTCTGCAGTTCATCTTCCTGCTTTCCTTCTGGAAAATTCTGAGAAGTATAAATTTCTTTTGCCTGGAAATTGCAAGAGAGAGAGATGA 1176 0.4277 MWWMMGETGGNYCSKKSDDLCSNVCGQESSQVSGMSRIRCILRGLDVKTYIFMFAVVPMCVFGFYIHGQKISYFLRPLWEKAPKPFHVIPHYYNENVTMENLCRLHGWGVREYPRRVYDAVLFSNELEILTLRWKELYPYITEFVLLESNSTFTGLPKPLVFNINKEQFKFVEPRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSAHTINLLRWCDEVPSILHLQLKNYLYSFEFHVDDKSWRASIHRYQTGKTRYAHYRQSDDILADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPERIQRVICKGADLFDMLPEEYTFKDIIGKMGPIPHSYSAVHLPAFLLENSEKYKFLLPGNCKRER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00857 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Pumo6g00857 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 35 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00857 Pumo-Chr6 10703558 10705561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00857 1 390 Glycosyltransferase AT1G12990 79.487 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00857 K00737 - gmx:100787062 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00857 6 10703558 10705561 Pumo6g00857 6 10703558 10705561 ECH