Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00678 ATGAACAACTCCCTCTACAATTTAAGATCTTCGCCGCCATCAACTTGTGGAGGTGGAACTGTGGATTACGTCAATGGCTTCAACGAAAAGGATACACTGTACTTAGAGAACATAGAGGAAAGGGAAATTGGGGGCACCCCTCCTATAATCCAGACAGTAAGAGCGGCATTGGCATTTTGGGTGAAAGAGTACATCGGCTACAAAGAGATTGAGAAACGTGAACAAATGTACATTAACAAAGCACTTAAGAGACTCAAATCGAACCCAAACATTGAGATTCTTGGCAACTTGAGCACTAAACGGCAAGCTATATTATCATTTGTCATTTATTCTACCACCAATAACTCTTTATCACCCGGTTGGGGCATTAAATGGCTAGATGATATCAAGAAACAGGAAAATGAAAGAGAACTTAATTTATGGGCAGAGACAGGGAGCAAAAGAGGTAAGCTACTTCATGGCCCTTTTGTAGCAACATTGCTAAGTGACCTCTTTGGCATCCAAGCTCGTGGTGGGTGTGCTTGTGCTGGACCTTATGGCCACCAATTGCTCAATATCAACGAATCTCAATCGATTGCTATTAGATCAACAATTCAAGAGGGTTATGTTGGAGTAAAACCTGGATGGACTAGAGTTAGTTTTCCTTATTACATGGAGGGGGAGGAATTTGAGTTCATTTTAACAGCAATAGAGTTTGTAGCAATCTATGGCCAACGGTTCCTTCCCCTATATAGCTTCAATTTGAGAAACGGCAGTTGGAGAATGAAGCCAGACAAACTTGAGGCTCTGATCAAGGAAAAGAATTGCAACTTTCAAAAAACTCTAGCGGAAACAAACAGTGATTTGAAAGCACTCAAAACAGGCAGTGAATATAATATTGGAGTTAAACAAGTTAGTATGTTAAGGAAATCATACTTAGATATAGCAAAATATATTGCTAATCTTCTCCCTAAGTTCCCTTTTGAAAGCATACTCCATGAAGATGTAAATCCCAGTACCCTCTATTTTAGAGTTTAA 1017 0.3963 MNNSLYNLRSSPPSTCGGGTVDYVNGFNEKDTLYLENIEEREIGGTPPIIQTVRAALAFWVKEYIGYKEIEKREQMYINKALKRLKSNPNIEILGNLSTKRQAILSFVIYSTTNNSLSPGWGIKWLDDIKKQENERELNLWAETGSKRGKLLHGPFVATLLSDLFGIQARGGCACAGPYGHQLLNINESQSIAIRSTIQEGYVGVKPGWTRVSFPYYMEGEEFEFILTAIEFVAIYGQRFLPLYSFNLRNGSWRMKPDKLEALIKEKNCNFQKTLAETNSDLKALKTGSEYNIGVKQVSMLRKSYLDIAKYIANLLPKFPFESILHEDVNPSTLYFRV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00678 338 Gene3D Aspartate Aminotransferase, domain 1 44 238 IPR015422 GO:0003824
Pumo6g00678 338 SUPERFAMILY PLP-dependent transferases 10 231 IPR015424 -
Pumo6g00678 338 Pfam Aminotransferase class-V 10 111 IPR000192 -
Pumo6g00678 338 PANTHER CYSTEINE DESULFURASE 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00678 Pumo-Chr6 8534296 8537052 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00678 - - gmx:100776921 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00678 6 8534296 8537052 Pumo6g00678 6 8534296 8537052 ECH