Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00672 ATGTCGAATACGGATCAGACAGTACTGAATCGGCGGCCATCAAGAAGCGCCGCGACGACGACGTTTTCCCTGGAGGTATTCGACAACGAAGTCGTGCCCTCCTCACTCGCCTCCATTTCTCCCATTCTCAGAGTCGCCAACGAGATTGAAAGTGAACGCCCCAGGGTTGCCTATCTCTGTAGGTTCTATGCCTTCGAAAAAGCGCACAGGCTAGATCAGAGTTCTAGCGGGCGTGGCGTCAGGCAGTTTAAGACCTTGTTGCTACAGCGATTGGAGAGGGACAATCCAGCTAGTCTTGCTTCTCGGGTTAAGAAAACAGATGCGAGAGAAATTCAATCCTATTATCAGCAATATTATGAACATTATGTCAGAACTCTCGACCAAGCGGATCAGGCAGACAGAGCCCAGCTCAGCAAAGCTTACCAGACTGCTGGGGTTCTATTTGAAGTGCTTTGTGCCGTTAATAAGACTGAGAAGGTCGAAGAAGTTGCTCCTGAGATTATCGCGGCTGCTAGAGATGTCCAGGAGAAGACAGAGATTTATACGCCTTACAATATTCTTCCTCTGGATGCTGCTGGTGTTTCTGTGCCCATTATGCAATTTGAAGAGATTAAGGCTGCTGTTTCTGCGCTTTGGAATACTCGTGGCTTGAACTGGCCTAATTCATTTGAGCAACAGAGGCAGAAAACTGGAGATTTAGACATGCTTGATTGGCTTAGAGCCATGTTTGGTTTTCAGAGGGACAACGTCAGGAATCAGAGAGAGCATCTGATTTTGCTTCTTGCTAACTCTCATATAAGGCTACACCCTAAACCCGAGCCTTTCAACCTGGCACTTAAATTCTGTGTTCTTTTTTATTTGTTTTCCTTTTGGTTTTATCAAAATCAGCTCGATGATCGTGCTGTTGATTCAGTGATGAAAGATCTCTTTAAGAATTACAAATCATGGTGCAAATTCTTGGGACGAAAACATAGTTTACGACTTCCTCAAGGTCAGCAAGAGATACAGCAGAGGAAGTTGCTTTATATGGGCCTGTATCTTCTTATCTGGGGTGAAGCATCCAATGTTCGCTTCATGCCAGAGTGTCTATGCTACATATTTCACAACATGGCATATGAACTCCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAATATCAAGCCTTCTTATGGTGGTGATGACGAGGCATTCCTGCGCAAGGTTATAACTCCCCTGTACCGAGTAATTGAAAGGGAAGCCAAGAAGAGCAGACATGGAAAGGCTCCACACTCGGCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGACATCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTCTTTAAATCAACAAGTGATTTGGCACAGGGAAGAAAGGGTGCTCCAAGAAAATCTGGAAAAACTGGCAAATCAAATTTTGTTGAGACGCGAACATTCTGGCACATCTTCCGCAGCTTTGATCGTCTGTGGACATTTTTTATACTGGGTTTGCAGGTGATGTTCATTATTGCTTGGGAAGGGATTTCACTGACGGAAATATTTCAAAAGGATGTCTTATATAATCTATCTAGTATATTCATCACAGCATCCATTCTGCGCTTGCTTCAAAGTATCTTGGACCTGATCCTGAACTTTCCAGGCTATCATCGATGGAAATTCACTGATGTGCTAAGAAATATTCTTAAAGTCTTTGTCAGTCTCTTTTGGGTTATCATTCTTCCACTCTTCTATGTTCGTTCCTTCAAGGGTGCACCCGAGGGTCTGAAGCAGTTGCTTTCCTTTTTCAAACAAATAAAAGGCATTCCGCCATTTTACATGCTGGCAGTTGCATTATATTTGCTTCCAAATTTACTAGCAGCTGTTCTGTTTCTTTTCCCAATGTTAAGGCGTTGGATTGAAAACTCAGACTGGCACATAGTTAGATTCTTCTTATGGTGGTCTCAGCCAAGCATCTATGTTGGAAGAGGAATGCATGATAGTCAATTTGCTCTCATGAAGTACACTATATTTTGGTTGTTGCTTTTGACTTGTAAATTTTTATTCAGCTTTTTTGTCCAGATAAAACCTCTAGTTAGGCCAACAAAGGACATAATGAGCATTCGACATGTTAATTATGGTTGGCATGCATTTTTTCCCAATGCTCGAAATAACTATAGTGCAGTAGTTGCACTCTGGGCTCCTGTACTTTTGGTTTATTTCATGGACACTCAAATTTGGTATGCAATCTTCTCAACTTTGTACGGTGGTGTTGTTGGAGCCTTTGATCGTCTAGGAGAGATACGCACTCTGTACATGCTAAGATCACGGTTTCAGTCATTGCCTGGTGCATTCAACACATACTTGGTTCCTTCTGATAAGAAGCAAAAAGGGAGATTCTCCTTCTCAAAGAAATTCACTGAGATTTCTGCAAGCAAAAGAAATGAAGCTGCCAAATTTGCCCAATTATGGAATGAGATTATTTGCAGTTTTCGTGAGGAGGATCTCATAAATTCTATGCTTTCTCTTCCATCTTTTCATTTTTCTGCCCATCACCTATTTAGGACTAAACTATGTTTGCATGACTCCAGGGAGATGGATCTTTTGCTAGTTCCTTACTCATTGGGTCATAGTCTGAAAATAATTCAGTGGCCACCATTTTTGCTTGCAAGCAAGATTACTGTAGCACTGGATATGGCAACTCAGTTTCGAGGGAGGGACTCTGATCTTTGGAAGCGCATATGTGCAGATGAATATATGAAATGTGCTGTGATTGAATGCTATGAATCCTTTAAACATGTTCTACATGATTTAGTGACAGGAGAAACTGAAAAAAGTATAATTTCCATCATCATTAAAGAAGTCGAGAGCAACATCTCAAAGAATACACTTCTTACAAATTTCCGTATGGGCTTTTTACCCTCCCTTTGTAAGAAGTTCGTGGAGCTTGTGGAAATCTTGAAAAATGGAGATCCATCCAAGCGGGGTACAGTGGTGGTCTTGCTGCAAGACATGTTAGAAGTGGTTACTGATATGATGGTGAATGAAATCAGCGAATTGGCAGAACTTAATCAAAGTAGTAAGGATACTGGACGACAAATTTTTGCTGGTACAGAGGCAAAACCTGCTATACTATTCCCTCCTGTGGTTACAGCACAATGGGAGGAACAGATTAGACGTCTTTATCTACTCTTGACTGTGAAGGAATCTGCCATTGAAGTTCCCACAAACAGCGAAGTACGCAGAAGGGTTGCATTCTTTACCAATTCATTGTTCATGGATATGCCACGTGCTCCTCGAGTACGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTATATTCTAAGAATGACATTGAGGTTGAGAATGAAGATGGTGTGTCAATCATATATTACCTTCAAAAGATCTTCCCTGAGGAATGGAATAACTTCTTGGAGCGAATTGAGTGTAAGAAAGATAGCGAAATATGGGAGAAAGATGAGAACATATTACAGCTACGTCACTGGGCCTCATTAAGAGGACAAACACTTTGTAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCGATAAAGCTCCAGGCATTTCTTGATATGGCTTCTGAAAAAGAGATACTCGATGGCTATAAAGCTATTGCTGTTCCATCTGAGGAAGAAAAAAAGAGTCAGAGATCCTTATATGCCAGTTTAGAGGCTATGGCTGACATGAAATTCACATACGTTGCTACCTGTCAGAACTATGGCAATCAGAAGCGTAGCGGAGACCGTCGTGCAACAGATATCTTGAATTTGATGGTTAACAATCCCTCACTTCGTGTTGCATATATTGATGAAGTTGAAGAAAGAGAAGGTGGAAAACTACAGAAAGTTTATTATTCTGTATTGATCAAAGCTGTGGACAATCTTGACCAAGAAATATATCGAATAAAGCTTCCGGGTGCAGCAAAGTTAGGAGAAGGAAAGCCAGAAAACCAAAATCATGCCATCATTTTTACTAGAGGGGAAGCTCTTCAGGCTATCGACATGAACCAGGATAATTACTTGGAAGAAGCTTTGAAAATGCGTAACCTTCTGGAAGAATTTAATGAGGATCATGGAGTGCGCCCACCCACCATATTAGGTGTTCGTGAGCATATTTTCACTGGAAGTGTCTCTTCCTTGGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCGCTAAAGGTTCGATTCCACTATGGTCATCCGGATGTTTTTGATAGAATTTTCCATTTTACCCGTGGAGGAATCAGCAAGGCTTCTTGTGGCATCAATCTGAGCGAGGATATATTTGCTGGATTCAACTCAACTCTAAGACGTGGGAATGTTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGATGTAGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCCTGTGGTAATGGAGAGCAGACACTAAGCAGGGATATCTACCGATTGGGGCATCGATTTGACTTTTTCCGCATGCTATCATTTTATTTTACAACCGTTGGATTTTATGTCAGCTCAATGTTAGTGGCCATCACGGTTTATGCTTTCCTGTATGGCAAATTTTACTTATCATTGAGTGGATTGGAGGCTGCTATAATTAAGATAGCTAGGAAAAAGGGAGACGATCCATTAAAGGCAGCAATGGCTTCCCAATCCGTTGTTCAAATAGGTCTTCTGATGACTCTGCCCATGGTTATGGAAATTGGACTAGAGAGAGGATTTAGAACTGCACTAAGTGAAATCATAATAATGCAGCTGCAGCTAGCACCCGTTTTCTTCACTTTCTCACTAGGGACTAAGATGCACTATTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTAGTTCGTCATGAGAGGTTTGCGGAAAACTACAGGATGTATTCTAGGAGTCACTTTGTAAAAGGGTTAGAGTTAGCTATACTGCTTATATGTTATAGGCTTTATGGAACAGCGACCCCTGATTCAACAACATATGCCCTTCTCTCATTATCAATGTGGTTTTTGGTGTGTTCTTGGTTGTTCAGTCCTTTCCTTTTTAATCCATCGGGATTTGAGTGGCAGAAGATAGTTGAGGATTGGGATGATTGGGCAAAATGGATAAGTAGTCGAGGTGGTATCGGTGTTCCTTCAAACAAGAGCTGGGAATCATGGTGGGATGAGGAGCAGGAACATCTGCAGCACACTGGGATTTGGGGGAGGATTTGGGAGGTCATTCTTGCCCTGCGTTTCTTTGTCTATCAGTATGGGATTGTGTATCATCTACATGTTGCTAGAGGTGACAAGAGCATCACGGTTTATGCTCTGTCCTGGCTAGTTGTAGTAGCTGTCATAGTCATATTGAAGATAGTGTCCATGGGTAGAAAGACGTTCAGTGCAGATTTCCAGCTGATGTTTCGTCTCCTCAAAGTGTTTCTGTTTATTGGAACCGTTGTCATTCTGGTCTTGATGTTTACCCTACTTAGTCTCACAGTTGGTGACATCTTTGCGAGCCTCCTAGCCTTTTTGCCGACAGGTTGGGCATTTATACAGCTCAAGCATGTAGGACCATTGGTGAAGGGAATTGGAATGTGGGGGTCTATCAAAGCGTTATCAAGAGGGTATGAATACGTGATGGGAGTGGTTATCTTTGCACCGGTGGCCATATTGGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGACTGCTATACAACCAAGCTTTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCTGGTGGCAAGAAGAATAAATAA 5865 0.4215 MSNTDQTVLNRRPSRSAATTTFSLEVFDNEVVPSSLASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNPASLASRVKKTDAREIQSYYQQYYEHYVRTLDQADQADRAQLSKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYTPYNILPLDAAGVSVPIMQFEEIKAAVSALWNTRGLNWPNSFEQQRQKTGDLDMLDWLRAMFGFQRDNVRNQREHLILLLANSHIRLHPKPEPFNLALKFCVLFYLFSFWFYQNQLDDRAVDSVMKDLFKNYKSWCKFLGRKHSLRLPQGQQEIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPLYRVIEREAKKSRHGKAPHSAWCNYDDLNEYFWTSDCFSLGWPMRDDGEFFKSTSDLAQGRKGAPRKSGKTGKSNFVETRTFWHIFRSFDRLWTFFILGLQVMFIIAWEGISLTEIFQKDVLYNLSSIFITASILRLLQSILDLILNFPGYHRWKFTDVLRNILKVFVSLFWVIILPLFYVRSFKGAPEGLKQLLSFFKQIKGIPPFYMLAVALYLLPNLLAAVLFLFPMLRRWIENSDWHIVRFFLWWSQPSIYVGRGMHDSQFALMKYTIFWLLLLTCKFLFSFFVQIKPLVRPTKDIMSIRHVNYGWHAFFPNARNNYSAVVALWAPVLLVYFMDTQIWYAIFSTLYGGVVGAFDRLGEIRTLYMLRSRFQSLPGAFNTYLVPSDKKQKGRFSFSKKFTEISASKRNEAAKFAQLWNEIICSFREEDLINSMLSLPSFHFSAHHLFRTKLCLHDSREMDLLLVPYSLGHSLKIIQWPPFLLASKITVALDMATQFRGRDSDLWKRICADEYMKCAVIECYESFKHVLHDLVTGETEKSIISIIIKEVESNISKNTLLTNFRMGFLPSLCKKFVELVEILKNGDPSKRGTVVVLLQDMLEVVTDMMVNEISELAELNQSSKDTGRQIFAGTEAKPAILFPPVVTAQWEEQIRRLYLLLTVKESAIEVPTNSEVRRRVAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDIEVENEDGVSIIYYLQKIFPEEWNNFLERIECKKDSEIWEKDENILQLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMASEKEILDGYKAIAVPSEEEKKSQRSLYASLEAMADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKLQKVYYSVLIKAVDNLDQEIYRIKLPGAAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFNEDHGVRPPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHFTRGGISKASCGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTVGFYVSSMLVAITVYAFLYGKFYLSLSGLEAAIIKIARKKGDDPLKAAMASQSVVQIGLLMTLPMVMEIGLERGFRTALSEIIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHERFAENYRMYSRSHFVKGLELAILLICYRLYGTATPDSTTYALLSLSMWFLVCSWLFSPFLFNPSGFEWQKIVEDWDDWAKWISSRGGIGVPSNKSWESWWDEEQEHLQHTGIWGRIWEVILALRFFVYQYGIVYHLHVARGDKSITVYALSWLVVVAVIVILKIVSMGRKTFSADFQLMFRLLKVFLFIGTVVILVLMFTLLSLTVGDIFASLLAFLPTGWAFIQLKHVGPLVKGIGMWGSIKALSRGYEYVMGVVIFAPVAILAWFPFVSEFQTRLLYNQAFSRGLQIQRILAGGKKNK 1954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00672 1954 Pfam 1,3-beta-glucan synthase component 1077 1772 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Pumo6g00672 1954 Pfam Vta1 like 38 165 IPR039431 -
Pumo6g00672 1954 FunFam callose synthase 3 24 181 - -
Pumo6g00672 1954 Coils Coil 1353 1373 - -
Pumo6g00672 1954 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 339 450 IPR026899 -
Pumo6g00672 1954 Gene3D - 24 179 IPR023175 -
Pumo6g00672 1954 SMART FKS1_dom1_2 337 453 IPR026899 -
Pumo6g00672 1954 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 101 1949 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00672 Pumo-Chr6 8440568 8454648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00672 10 1954 Glycosyltransferase AT1G05570 59.132 0.0 2358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00672 K11000 - gmx:100777985 3620.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01694 10 22318613 22333137 Pumo6g00672 6 8440568 8454648 PCT