Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00663 ATGCACCTTCTCAAACTTCCTCGCTCTCCATCTTCCTTCGGGAATGCCTTCTTTCCGGTGGGGAATAATAGTTTATTCCGTAAGAATCAGAGATGTTTCAGACCGTCCATAACGTGTTCGGCTGTTAGGAACGATTCTTTTGTGCCTTCTATTGAACAACTAAGTGATGCACGGGTTATATACTCTGTCGCTTCATCTATGGGCCACAACCAGGAGTCTCATCCAGAATCGCATTTTAGAGTTCCCGCGATTGTGAATGCTCTAGAAGAAATGCAGCTCACTTCAAAGTTCCGTGGCTCTGAGGTAATTGAACTTCAACATTTTGAGCCTGCTTCAGTAGATGATATTGCAAGTGTGCATGCAAGAGCCTATGTTTCTGGCCTTGAAAAGGCTATGGATCAAGCTTTGGAGAAGGGCCTTATTTTCATTGATGGTTCTGGACCAACATATGCTACTGCCACTACCTACCAGGAGTCAATAATTGCAGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTGCAGGTTCGAAGATAAAGAAAGATGCACCCACTGGTTTTGCTCTGATAAGACCGCCAGGACATCACGCTGTTCCACAAGGACCTATGGGCTTCTGCATTTTCGGCAATGTGGCCATTGCGGCCCGTCATGCTCAGCGTGTTCATGGACTGAAGCGCGTGTTTATAATTGACTTTGATGTTCATCATGGGAATGGATCAAATGATGCTTTCTATGATGATCCAGATGTATTTTTTCTTTCATTTCATCAAGATGGAAGCTATCCAGGTACTGGCAAATTTGATGAGGTGGGTAGTCGAGATGGTGAAGGAACCACACTAAATCTGCCTCTTCCTGGAGGCTCAGGTGATACTGCTATTAGAACTGTGTTCGATGAAGTCATTGCACCATGTGCTCAAAGATTTAAACCAGACATCATTCTTGTTTCTGCTGGGTATGACGGCCACGTGTTGGATCCACTAGCTAATCTTCAATATACAACCGGAACATATTACATGCTCGCGTCCAGCATCAAACAATTAGCGAAAGATTTATGTGGGGGCCGATGTGTGTTTTTCTTGGAGGGAGGTTATAATCTGAAGTCTCTTTCATATTCCGTGGCAGACACATTCCGTGCTCTTCTTGGGGATCGAAGCTTGGCATCTGAGTTTGATGACCCTAACATTTTGTATGAAGAGCCATCCACAAAAGTTAAGCAAGCTATTCAGAGGATAAAACACATTCATTCCCTGTGA 1254 0.4434 MHLLKLPRSPSSFGNAFFPVGNNSLFRKNQRCFRPSITCSAVRNDSFVPSIEQLSDARVIYSVASSMGHNQESHPESHFRVPAIVNALEEMQLTSKFRGSEVIELQHFEPASVDDIASVHARAYVSGLEKAMDQALEKGLIFIDGSGPTYATATTYQESIIAAGAGLALVDSVVAGSKIKKDAPTGFALIRPPGHHAVPQGPMGFCIFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGSNDAFYDDPDVFFLSFHQDGSYPGTGKFDEVGSRDGEGTTLNLPLPGGSGDTAIRTVFDEVIAPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDRSLASEFDDPNILYEEPSTKVKQAIQRIKHIHSL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00663 417 Pfam Histone deacetylase domain 74 379 IPR023801 -
Pumo6g00663 417 PRINTS Histone deacetylase superfamily signature 226 241 IPR000286 -
Pumo6g00663 417 PRINTS Histone deacetylase superfamily signature 192 215 IPR000286 -
Pumo6g00663 417 PRINTS Histone deacetylase superfamily signature 310 320 IPR000286 -
Pumo6g00663 417 SUPERFAMILY Arginase/deacetylase 69 384 IPR023696 -
Pumo6g00663 417 CDD HDAC_classII 74 381 - -
Pumo6g00663 417 Gene3D Histone deacetylase domain 44 416 IPR037138 -
Pumo6g00663 417 PANTHER HISTONE DEACETYLASE 2-RELATED 52 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00663 Pumo-Chr6 8340440 8346988 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00663 - - gmx:100788664 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00663 6 8340440 8346988 Pumo6g00663 6 8340440 8346988 ECH