Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00619 ATGGGGGGTCTTTGTTCAAAGTCTGCCAAAGGTGACAAGGTGTTTGCCAAAGCAGATGGACATTCTGATAACCATAAATCTGATGGTAAGAACCACAAGTCCACCACCATGCCCAGTGATTTGGCAAGTGCAGGGGATCATGGAGTGGACAAGAAAAAGAAAGAAGGTGCTGCTGCTGCCCCTGCTGCAGGGACTGGTTCTGATGATTTCTATGATGGAATCCCACGGTTTACTGATTCTTTTCCCCACAAGTCTAGGTCAGTAAGATCAAGGCAAGCTGTGGCAAAGGTCTCAGAGGTGAGTTTACGCCTGGGCAGAGCTGGTATTGACGTTTTGGACACTCTTGGGAGCAGCATGACAAATTTAAGTGGCGGTGGGTTTGTATCTGGAGCTGTGACAAAGGGGAATGAAATTGGTATTTTAGCATTTGAGGTTGCAAACACTATTGTCAAGGGTTTTAGTCTTATGGAATCTCTTTCGACAAAAAGTATTAAGCATTTAAAAGAAGAGGTGCTTCCATTAGAGGCTGTGCAAGATTTAGTATCAAAGGATATGGATGAACTTCTAAGGATTGTTGCTACAGACAAGAGGGAAGAGTTGAAAGTCTTTTCTGATGAGGTCATTCGTTTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTGGACCGATACTTTGAGAAAATTAGCAGAGAACTTAATTCTCAAAGAAAATCAAAGGAGGAGGCAGAATTACTAATGCAACAGTTGATGACTTTGGTTCAGTTTACAGCTGAATTATACCATGAGTTACATGCTTTGGATAGATTTGCACAAGATTATCAGCATAAGCGTGAAGAGGATGATAATTCAGGTGCAGCTCAAAGTGGTGATGGCCTTTCAATCTTGAGGGCAGAACTTAAAAGTCAAAAGAAGCAAGTTAAACATTTGAAAAAAAAGTCACTCTGGTCCAGAAGTTTGGAGGAGATTATGGAGAAGCTTGTAGAGATAGTCCATTTTTTGCATTTGGAGATAAACAATGCCTTTGGCACTGCAGATGCCCATAAACCATTAATTGGAACCATCAGCAATCGCCAAAGATTGGGTCCTGCAGGCCTTGCTTTGCATTATGCTAATATAGTCCTCCAAATTGATACTCTTGTTGCCAGATCCAGTTCTATGCCTGCAAATACAAGGGATGCATTGTATCAGAGCTTGCCTCCTAATATAAAATCAGCTTTGCGTTCCAAATTACCAAGCTTTCATGTTGTAAAAGAGCTCACCATATCAGATATTAAACAAGAGATGGAGAAAACGTTGCAATGGCTGGTTCCCATTGCAACAAACACAGCCAAAGCACATCATGGTTTTGGTTGGGTAGGGGAGTGGGCAAGCACTGGCTCTGAGCTGAATAAGAAAACCATGAAGGCTGATGTTATGCGGATTGAAACGCTTCACCATGCTGATAAAGACAAAGTAGAAAATTATATTCTTGAACTTCTCCTATGGCTTCACCGCTTGGCCATCAAAAGTAAAGCCAGCATTGATACTGGAGAAATGAGGTCTACCTTAAAGTCCCCTGTTGGCACTGCCCTGCAAACGACAAATCAACAATCTACAAAAGCCTTACTGCCATTGTTAACAACCGACGAGCAGAATATGCTACAAGATGTTAGTAATAAAATTCGTATAAGAAGGATCAGTAAAAGCTTGGACTTTGACAGTGTGAAGATTGGGTTGACAGATAACGACAGACTTACTAAGAGTAGCAGTTATTCTTATTCATCAACAAGTAGAAGCAAGGAATTATATTTTAATAGAATTTTGTCTAAGCTTCCTGTGATTGATTTTGGTATTGACAAAAAGAGAGCCTTGGATGTGATTGACAGATTAGATGTGGTCAGATAA 1887 0.4091 MGGLCSKSAKGDKVFAKADGHSDNHKSDGKNHKSTTMPSDLASAGDHGVDKKKKEGAAAAPAAGTGSDDFYDGIPRFTDSFPHKSRSVRSRQAVAKVSEVSLRLGRAGIDVLDTLGSSMTNLSGGGFVSGAVTKGNEIGILAFEVANTIVKGFSLMESLSTKSIKHLKEEVLPLEAVQDLVSKDMDELLRIVATDKREELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISRELNSQRKSKEEAELLMQQLMTLVQFTAELYHELHALDRFAQDYQHKREEDDNSGAAQSGDGLSILRAELKSQKKQVKHLKKKSLWSRSLEEIMEKLVEIVHFLHLEINNAFGTADAHKPLIGTISNRQRLGPAGLALHYANIVLQIDTLVARSSSMPANTRDALYQSLPPNIKSALRSKLPSFHVVKELTISDIKQEMEKTLQWLVPIATNTAKAHHGFGWVGEWASTGSELNKKTMKADVMRIETLHHADKDKVENYILELLLWLHRLAIKSKASIDTGEMRSTLKSPVGTALQTTNQQSTKALLPLLTTDEQNMLQDVSNKIRIRRISKSLDFDSVKIGLTDNDRLTKSSSYSYSSTSRSKELYFNRILSKLPVIDFGIDKKRALDVIDRLDVVR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00619 628 Pfam Protein of unknown function (DUF668) 360 445 IPR007700 GO:0045927
Pumo6g00619 628 Coils Coil 226 246 - -
Pumo6g00619 628 MobiDBLite consensus disorder prediction 1 64 - -
Pumo6g00619 628 Coils Coil 293 313 - -
Pumo6g00619 628 PANTHER OS01G0873900 PROTEIN 1 625 IPR045021 GO:0045927
Pumo6g00619 628 Pfam Domain of unknown function (DUF3475) 140 196 IPR021864 GO:0045927
Pumo6g00619 628 MobiDBLite consensus disorder prediction 12 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00619 Pumo-Chr6 7849946 7857867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00619 - - gmx:100804075 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00619 6 7849946 7857867 Pumo6g00619 6 7849946 7857867 ECH
Pumo6g00619 6 7849946 7857867 Pumo10g01767 10 23250590 23259727 PCT