Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00595 ATGGGAGGAACTTCTGCAGATCTTCACCACCATGAATCAGACATAGAACTCACTGATGCTGAAAGGACTGACACGAAGTTAGGGGCTTCTGAGTCAAAAGCTGGCACTGATGTTAGACTTGACAGTGGCACTGGCGCCAAATCCGAGGTTGAAGCTGAAGGACACTACGTTGAGGTCACCATGGACATTCATCGTGACTCTGTGGCCTTACACAGTGTTAAAACTGTTGCTGGTGATGACATGGTGGAAGAGGGTGAGAAATTGGGTTTGATGGGCAGCAAGAGGCTTGAGAAGAAAACATCCTTTGGTGCCTCTGTGGTTCAGAGTGCTGCCAACCGCATGAAGCAGCTGAAGCGTTTGGCATCATTTTCCAAACCAGCGCCTAAACACTTTGAAAGGACCAAGTCTGCAGTGGGTCATGCTCTCACAGGGCTCAAGTTTATCAGCAAGACCGATGGTGGTGCAGGATGGGGTGAGGTCCAGAAGCGGTTTGACAAGCTTACTGCTACCACTGATGGCTATCTTCCTCGTGCTCTCTTTGCCCAATGCTTAGGGTTGAACAAGGAGTCTGAGGCTTATGCAGAGAAGCTTTTTGATACTCTTGCTAGGCAGAGAGGTATTCAGGGGGGTTCCATTAACAAGATCCAGTTGAAGGAGTTCTGGGACCATATTTCTGACCAGAGCTTTGATACTAGGCTCAAAACATTCTTTGACTTGGTTGATAAAGATGCAGATGGCAGAATCACCGAGGAGGAAATTAAAGAGATTATATGCCTTAGCGCCACTGCCAACAAACTCTCAAACATCCAGAAACAAGCAGAGGAATATGCGGCTTTGATCATGGAAGAATTGGACCCTGATGACACAGGATACATCATGATAGACAACCTGGAGACGCTCTTGTTGCATGGACCAGAGGAAACTACAAGAGGAGAAAGTAAGTACCTGAGCCAAATGCTAAGCCAAAAACTTAAGCCTACATTTGTGGACAGTGCAATTATGAGGTGGTGTAGAGATGCCAAGTACTTCTTGCTGGACAATTGGCAAAGATCTTGGGTACTTGCACTTTGGATTGGTGTGATGTTAGGCCTATTTGCCTATAAATATGTGCAATATCGGAGAAAAGCTGCCTATGAGGTGATGGGCCATTGTGTATGCATGGCAAAAGGTGCAGCCGAGACACTTAAATTGAACATGGCTCTTATCTTGTTACCTGTTTGCCGGAACACCATCACCTGGCTCAGAAATAAGACCAAGCTAGGTGTTGTAGTTCCTTTGGATGACAACATCAACTTCCACAAGGTGATAGCTGTGGCAATAGCAATTGGTGTTGGTATACATGCTATCTATCATCTTACATGTGATTTTCCTCGCCTTCTTCATGCAAGCGATGAAAAGTACAAGCTCATGCAACCTTTTTTTGGAGACAGACCATCTGATTATTGGTATTTTGTCAAATCATGGGAAGGAGTAACAGGGATTATAATAGTTGTGCTAATGGCAATAGCCTTTACGCTGGCTAATCCTAGGTTCAGGAGAGGCCGGGCCAAACTACCCAAACCTTTCAGCAAACTCACAGGTTTCAATGCCTTTTGGTATTCCCATCACCTCTTCATCATTGTCTATGCCCTGTTGGTTGTGCATGGAATCAAACTTTACTTGACTAAGGAATGGTACAAGAAAACGACCTGGATGTATCTGGCTATTCCCATCACCATTTATGCATTGGAAAGACTGGTGAGAGCACTTAGATCGAGCATTAAGTCCGTCAAAATATTGAAGGTGGCTCTTTATCCTGGAAACGTGTTATCACTTCAAATGTCAAAGCCGCAGGGGTTTAGCTACAAAAGTGGACAATACATGTTTGTCAATTGTGCAGCTGTATCTCCCTTTGAATGGCATCCATTTTCCATAACTTCCGCCCCTGATGATGATTACCTTAGCGTTCACATAAAAATACTTGGTGATTGGACTCGAAGTCTGAAAGCCAAATTCACACAGGCGTGCCAGCAACCCCTCAATGGACAGAGTGGACTTCTAAGAGCTGAATGCTTGAAAGGAGATAACAGCCCAACTTCTTTTCCTAAGGTTCTGGTGGATGGTCCGTATGGGGCACCTGCACAAGACTACAGGGAGTATGAGGTGGTCTTGCTAGTGGGGCTTGGAATTGGGGCTACCCCAATGATAAGTATACTAAAGGACATGGTGAATAATTTTAAGGCCATTGATGAGGAGGAGGGGACCGCAATAGAGGAAGGAATAAGTGGGTCAGTTGGTGCTAAATCACCAACGACAGCCCAACAGAAAAGCGCCAGGTTGAGTGACTTCAAGGCAAGGAGGGCATATTTCTACTGGGTGACTAGAGAGCAAGGTTCCTTTGACTGGTTCAAAGGGGTGATGAACGAAGTGGCTGAAGAGGACCGAAGGAAAGTGATTGAACTCCACAGCTACTGCACCAGCGTTTACGAAGAGGGTGATGCTCGCTCTGCTCTTATTGCTATGTTGCAGTCCCTAAACCATGCAAAGAATGGAGTGGACATAGTCTCTGGCACTCGCGTCATGTCTCACTTTGCCAAACCCAATTGGCGCACTGTCTACAAGCGCATTGCGCTTAATCATCCAGATGCCCGAGTTGGTGAGTTCCCACTCCTTGAACTGACGTTGCGTTTGTTAATTTCTATCCTTCCGCCACTTAAAGTTAAAACACTTCAATAA 2715 0.4567 MGGTSADLHHHESDIELTDAERTDTKLGASESKAGTDVRLDSGTGAKSEVEAEGHYVEVTMDIHRDSVALHSVKTVAGDDMVEEGEKLGLMGSKRLEKKTSFGASVVQSAANRMKQLKRLASFSKPAPKHFERTKSAVGHALTGLKFISKTDGGAGWGEVQKRFDKLTATTDGYLPRALFAQCLGLNKESEAYAEKLFDTLARQRGIQGGSINKIQLKEFWDHISDQSFDTRLKTFFDLVDKDADGRITEEEIKEIICLSATANKLSNIQKQAEEYAALIMEELDPDDTGYIMIDNLETLLLHGPEETTRGESKYLSQMLSQKLKPTFVDSAIMRWCRDAKYFLLDNWQRSWVLALWIGVMLGLFAYKYVQYRRKAAYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWLRNKTKLGVVVPLDDNINFHKVIAVAIAIGVGIHAIYHLTCDFPRLLHASDEKYKLMQPFFGDRPSDYWYFVKSWEGVTGIIIVVLMAIAFTLANPRFRRGRAKLPKPFSKLTGFNAFWYSHHLFIIVYALLVVHGIKLYLTKEWYKKTTWMYLAIPITIYALERLVRALRSSIKSVKILKVALYPGNVLSLQMSKPQGFSYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIKILGDWTRSLKAKFTQACQQPLNGQSGLLRAECLKGDNSPTSFPKVLVDGPYGAPAQDYREYEVVLLVGLGIGATPMISILKDMVNNFKAIDEEEGTAIEEGISGSVGAKSPTTAQQKSARLSDFKARRAYFYWVTREQGSFDWFKGVMNEVAEEDRRKVIELHSYCTSVYEEGDARSALIAMLQSLNHAKNGVDIVSGTRVMSHFAKPNWRTVYKRIALNHPDARVGEFPLLELTLRLLISILPPLKVKTLQ 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00595 904 FunFam Respiratory burst oxidase homolog A 131 249 - -
Pumo6g00595 904 ProSiteProfiles EF-hand calcium-binding domain profile. 228 263 IPR002048 GO:0005509
Pumo6g00595 904 PRINTS Cytochrome B-245 heavy chain signature 528 548 IPR000778 GO:0016020|GO:0016491
Pumo6g00595 904 PRINTS Cytochrome B-245 heavy chain signature 695 708 IPR000778 GO:0016020|GO:0016491
Pumo6g00595 904 PRINTS Cytochrome B-245 heavy chain signature 436 454 IPR000778 GO:0016020|GO:0016491
Pumo6g00595 904 PRINTS Cytochrome B-245 heavy chain signature 718 735 IPR000778 GO:0016020|GO:0016491
Pumo6g00595 904 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 580 709 IPR017927 GO:0016491
Pumo6g00595 904 MobiDBLite consensus disorder prediction 1 49 - -
Pumo6g00595 904 Gene3D Translation factors 575 677 - -
Pumo6g00595 904 Pfam Ferric reductase like transmembrane component 390 546 IPR013130 -
Pumo6g00595 904 PANTHER NADPH OXIDASE 193 879 - -
Pumo6g00595 904 CDD NOX_Duox_like_FAD_NADP 592 827 - -
Pumo6g00595 904 ProSitePatterns EF-hand calcium-binding domain. 241 253 IPR018247 -
Pumo6g00595 904 FunFam Respiratory burst oxidase homolog A 576 668 - -
Pumo6g00595 904 Gene3D - 704 881 IPR039261 -
Pumo6g00595 904 Gene3D - 131 249 - -
Pumo6g00595 904 Pfam Respiratory burst NADPH oxidase 131 231 IPR013623 GO:0004601|GO:0050664
Pumo6g00595 904 SUPERFAMILY EF-hand 159 305 IPR011992 -
Pumo6g00595 904 MobiDBLite consensus disorder prediction 7 28 - -
Pumo6g00595 904 SFLD NADPH oxidase subgroup (NOX) 128 881 - -
Pumo6g00595 904 SUPERFAMILY Riboflavin synthase domain-like 589 705 IPR017938 -
Pumo6g00595 904 Pfam FAD-binding domain 588 706 IPR013112 GO:0016491
Pumo6g00595 904 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 696 807 IPR039261 -
Pumo6g00595 904 Pfam Ferric reductase NAD binding domain 713 879 IPR013121 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00595 Pumo-Chr6 7512199 7518672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00595 44 891 Miscellaneous Gene Families AT5G51060 63.426 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00595 K13447 - gmx:100808271 1624.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00595 6 7512199 7518672 Pumo6g00595 6 7512199 7518672 ECH