Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00549 ATGGAAATACTACGTTCGACCATGGCCTCATCCTTGTTCATCCTCGGAGTCCTCGCTTTTGTTGCAGGTAGCAGAAAAGGAATGAGGGTAGAGGTTGGGGACAAGGACAAGTGCAGCAAGTCGAGTATCCAAATAAACCAAAGCCCGACGGAACCACTCCCAAGTGGCATTCCCACATACACAGTTGAGATAGTGAACACGTGCGTGAGTGGCTGCAACATCTCAAACATTCACGTTGCTTGTGCCATGTTCACTTCTGCGCGCCTCATCAACCCTAAAATCTTCAAGCGCCTTTCCTACAATGATTGTCTCGTCAATGATGGCAAGCCATTCCGCAATGGGGCAATTATTTCCTTTAAATATGCCACTACCTTTCCTTTTCCTCTCTCTGTTTCCTCTGTCCTTTGTGGTACACCCTCCTCCATCTGA 429 0.4779 MEILRSTMASSLFILGVLAFVAGSRKGMRVEVGDKDKCSKSSIQINQSPTEPLPSGIPTYTVEIVNTCVSGCNISNIHVACAMFTSARLINPKIFKRLSYNDCLVNDGKPFRNGAIISFKYATTFPFPLSVSSVLCGTPSSI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00549 142 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 19 134 IPR040361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00549 Pumo-Chr6 6913512 6915130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00549 14 131 Glycosyltransferase AT4G32110 31.356 6.31e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00549 - - gsj:114424716 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00549 6 6913512 6915130 Pumo6g00549 6 6913512 6915130 ECH