Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00545 ATGTCTTCTGAAACCCTAAAAAACGAGCAACCTCAAGTGCAGGAAGAAGAAGCCCAGGCTGAAGACAACCACACCGAACAAGAAGATAATTCGGAGAAGAAAGAGATCGATGACAAAGGCGAAGAAGAAACGGATCAGGTGGAAGAAGAGAAAGAGGAAGAGGAAGAAGATGATGATGAGGAAGAAGAAGAGAAGGAGGAGCGTGTCGAAGTGAAGTCAAAAAAGTCAACGAAAGAAAGCGGTTCCGCTACTCCAGGAAGTGAGAGACCAACTAGGGAGAGGAAAACGGTGGAGAGGTACACTGTTTCTTCGCCCGATAAGTTTCCCAGATCTTCTTCTGTCAAAGTTCTCTCAATTGAAAAGGGCAACGGTACGCAGCTCAAGGACATTCCTAATGTGGCTTTCAAGTTATCAAAGAGAAAAGCTGATGATAACCTGCGTGCACTTCATAGTATACTGTTTGGGAAAAAAGCAAAGGCACACAATCTAAAGAGAAATATAGGACTGTTTTCTGGCTATGTGTGGGCTGAAAATGAGGAAAAACAGAGGGCAAAGATAAGGGAGAGGATTGACAAATGTGTGAAAGAAAAGTTGGTGGACTTCTGTAATGTGCTTAATATTCCGATAAATAAGACCACTATGAAGAAGGAGGAACTGTCTGCAAAGTTGTTGGAATTTTTGGAGTCCCCGCATGCTACAACTGATGTTCTGCTTGCTGATAAGGAAAAGAAAGGTAAAAAGCGAGCCAGAAAGCAAACCCCAAGCAAATCTTCTGGGGAAGGATCTGAAACACCTGCCAAGAAGCAAAAGCAAAATTCACAAGTTGGGAAAAGGCAAAAGCAGTCTTCTGACATCGAGGACAGTGATGCAGCTGAACCTTCGGATGCAGAAGATGATGTTTCAAGTCAAAAAAGTGAAAATGATAATGAGGAAAGCATGTCAGAGAAAGAGGAAGATAAAAAAAAGGCTCACAAACGTACTTCAAAAAAGATTAAGGAGGATCAAACCACACCTGTAAAGAAGATCACTGTTGTAAAGACTGCCAAGAGCAATGAAAAAACTCCTAAAAAATCTACTTCGAAAAAGGCTGTTACTGACAATACTTCCAAGTCCAAGCAATCTGCTTCCAAGAAACAGAAAACAGTAAAGGAAAACCAGAACTCTAAGGGGAAGGATGCAAACAAAAAACAAACTGACAAGTCTTCGAAGGCTTTAGTGAAGGATCAAGGCAAAGGCAAAAGTAGCGAGAAGACCAAAGCAGAACCTAGTAAGGAGGAGATGCATCGAGTGGTTGTTGACATTTTGAAGGAAGTAGATTTCAATAAGGCAACTTTATCTGATATCCTCAAGCAACTTGGTACTCACTTTGACGTGGATTTAATGCATAGAAAATCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCTGATGACGATGGAGAGGAAGCGGACAATGTTGGGGATGATGATGCAGATGAAGATGATGAGTGA 1500 0.412 MSSETLKNEQPQVQEEEAQAEDNHTEQEDNSEKKEIDDKGEEETDQVEEEKEEEEEDDDEEEEEKEERVEVKSKKSTKESGSATPGSERPTRERKTVERYTVSSPDKFPRSSSVKVLSIEKGNGTQLKDIPNVAFKLSKRKADDNLRALHSILFGKKAKAHNLKRNIGLFSGYVWAENEEKQRAKIRERIDKCVKEKLVDFCNVLNIPINKTTMKKEELSAKLLEFLESPHATTDVLLADKEKKGKKRARKQTPSKSSGEGSETPAKKQKQNSQVGKRQKQSSDIEDSDAAEPSDAEDDVSSQKSENDNEESMSEKEEDKKKAHKRTSKKIKEDQTTPVKKITVVKTAKSNEKTPKKSTSKKAVTDNTSKSKQSASKKQKTVKENQNSKGKDANKKQTDKSSKALVKDQGKGKSSEKTKAEPSKEEMHRVVVDILKEVDFNKATLSDILKQLGTHFDVDLMHRKSEVKDIITDVINNMSDDDGEEADNVGDDDADEDDE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00545 499 MobiDBLite consensus disorder prediction 255 279 - -
Pumo6g00545 499 PANTHER DEK PROTEIN 7 493 IPR044198 GO:0003677|GO:0006325
Pumo6g00545 499 MobiDBLite consensus disorder prediction 297 339 - -
Pumo6g00545 499 Pfam DEK C terminal domain 422 474 IPR014876 -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 1 110 - -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 17 40 - -
Pumo6g00545 499 Gene3D - 414 477 - -
Pumo6g00545 499 SUPERFAMILY DEK C-terminal domain 416 476 - -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 476 499 - -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 361 375 - -
Pumo6g00545 499 Coils Coil 176 196 - -
Pumo6g00545 499 Coils Coil 3 23 - -
Pumo6g00545 499 Coils Coil 33 69 - -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 41 66 - -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 478 499 - -
Pumo6g00545 499 FunFam DEK domain-containing chromatin associated protein 413 477 - -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 346 360 - -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 237 427 - -
Pumo6g00545 499 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 421 476 IPR014876 -
Pumo6g00545 499 MobiDBLite consensus disorder prediction 377 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00545 Pumo-Chr6 6788770 6794846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00545 K17046 - gmx:100785644 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00545 6 6788770 6794846 Pumo6g00545 6 6788770 6794846 ECH