Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00544 ATGTCCGTACGCCGTCTCAGGCTCGACTCCGATTCCGATGAAGAAGAACTTCAGCCCCAGCCACAGTCACATTTTCCGGCCGTGCCCGTTGAGATCTCCGACGACGATGACTTCATCGACGTCCTCGACAGCCTCTCTCCGCCCTCTCCCGCTTGTCCAGTCGCCGACTTCCTCCGCCGCCAGGGACTGTCCCTCAAGAGAGAGTGGCTCACTTGCTGCCTCTGCGAACTCCAAGCCTCCGTTACGGCCTTTGAACACCTCGACGTGGCCGCAAAAGCCAAACGGTGTCTCGAGCAGTTTCTCTTCGCCGACATGAATTACTGTGGCGGTGGCATGCTCCCTCCCAACATCGATTCCATGCACCTTCGCATTCTCCCTGGTCCTTATGTACTGCAGGTTGATGAAATAATTAATTTGACTTGTCCTCTACGAACGAGATATCAAAAAGCAGATCCTGGAATTAAAAGGTGTTTGAAGTTATCGATGACTGATGGCATTCAAAGAGTATTTGCAATAGAGTATAGGCCGGTCGAAGCTCTTGAAGTCTGTGCCTCTTCTGGATTAAAGGTTGCTATCTCTAATGTACATGTGCGTCGTGGACTTCTGATGCTGCTCCCTGAAAACATTGAAATTTTGGGGGGAATGGTTGAGGAGCTGGAAGCTGCTCGAAAACGGCTGGTTAAAGAATTGGAGAAGCCACCTAGGGGGAAAAGAACCAAAAATGGAGTTCTTCCTCCTTTAGCGACTAGAGCAACTCTTGCTGCGTGGCCTTCAAGTGGAGTTGATGATCTTGCACGCAGTGGCTCCACACTGCACAGTACTGATTCTGTCCAGGAAAACAACCAAGTTGCTGGCCCGAGCATGTCTGGCACTGGTGGTAACAGCTTAACAGCTGAAGATGCTTTGCCCATGGGTGCGCAAAATGTTGCTTCTAATTCAATACCCCACATGGTGTCAAATGCCGAGGCCATGAATATGGATATGCCTAGAGATACCAATCCTGTTTCCCGTGCTAGTCCTATGGCTAACCAGCTCTCTTCTGTCACATCGAAAGCTGAGGAGATGCACATAGATGTTGCTAATGTCACCAGGGAATATTCTGTTGACAATCAGTCTTCTAACATGGTTTCAAATGTTGCAGTCGCACATAATGACACTTTTCATATAACAAGAGAAAGTTCTGCAGCTACTGAGTGCCCTCCTGTTGTTGAAAATGTTGAGATATACAGGGATAGAACTCCAGTAGCCACAAATAGTTCTCATCCACGAAGAACCTCTCCCACTGTTTTAAACACTAGGGAATATTCTGTTGATAATCGGTCTTCTAACATGGTTTCAAATGTTTCAGCGGTACTTAATGACACTGTTCATATAACAAGGGAAAGTTCTGCGGCCACTGAGTACCCTCCCGTTGTTGAAAATGTTGAGACATGCAGGGATAGAACTCCAGTAGCCACAGATAGTTCTCATCCACGAAGAACCTCATCCACTGTTTTAAACACTAGGGAATATTCTGTTGACAATCGGTCTTCTAACATGGTTTCAAATGTTGCAGCGGCACATAATGACACTGTTCATATAACAAGGGAAAGTTCTGCAGCTACTGAATGCCTTCCCGTTGTTGAAAATGTAGAGACATACAGGGATAGAACTCCAGTAGTCACAGATAGTTTTCATCCACGAAGAACTTCTTCCACTGTTTTAAACACTAGCGATGTCGAGATGGTTGATGCCAGTGACCATCCACTCATACTGTCTGGAGACCAAGAGGTCCCTTACACATATATAGCTAGTTTGTCAGCCAAGTGGGCTAAAATGAAGGAGGAAGCTCCTTCAGTTCGGGGTAAAATAAAGTGCTTTTTGACTGCTGTAAAAAGATTCCAGTATAAGAAGAGGACAACATATGAGCTTCAGGCATATGTAGACGATGGTAGCCTTATTTCTGAAATCCTCATTGATCATGATGTTGTACAGAAAGGTATTGGTTTTTGTCCCGAGGAGGTAACTGCGGCTCTTTCTTCTCCTGACATGAAAATTGTCCACCAGATGAAGGATACAATGCGTAAATTTCAAGCTTTTTTAGCAAACTTTGAGGGAATAATTCTTGTGGAATTAAATAAAAAATCTTCCGTTCCACTTGCCCTAGAGATGAGTGAAGGGTGTCCTCAATCTGATGCACGGTTACTTCTGAGAAGGCTGAAGTCTCTTCACCCTCCACAAGTTCAAAAACCTACGGATCCAATTGAATTATCCCCGTAA 2259 0.4555 MSVRRLRLDSDSDEEELQPQPQSHFPAVPVEISDDDDFIDVLDSLSPPSPACPVADFLRRQGLSLKREWLTCCLCELQASVTAFEHLDVAAKAKRCLEQFLFADMNYCGGGMLPPNIDSMHLRILPGPYVLQVDEIINLTCPLRTRYQKADPGIKRCLKLSMTDGIQRVFAIEYRPVEALEVCASSGLKVAISNVHVRRGLLMLLPENIEILGGMVEELEAARKRLVKELEKPPRGKRTKNGVLPPLATRATLAAWPSSGVDDLARSGSTLHSTDSVQENNQVAGPSMSGTGGNSLTAEDALPMGAQNVASNSIPHMVSNAEAMNMDMPRDTNPVSRASPMANQLSSVTSKAEEMHIDVANVTREYSVDNQSSNMVSNVAVAHNDTFHITRESSAATECPPVVENVEIYRDRTPVATNSSHPRRTSPTVLNTREYSVDNRSSNMVSNVSAVLNDTVHITRESSAATEYPPVVENVETCRDRTPVATDSSHPRRTSSTVLNTREYSVDNRSSNMVSNVAAAHNDTVHITRESSAATECLPVVENVETYRDRTPVVTDSFHPRRTSSTVLNTSDVEMVDASDHPLILSGDQEVPYTYIASLSAKWAKMKEEAPSVRGKIKCFLTAVKRFQYKKRTTYELQAYVDDGSLISEILIDHDVVQKGIGFCPEEVTAALSSPDMKIVHQMKDTMRKFQAFLANFEGIILVELNKKSSVPLALEMSEGCPQSDARLLLRRLKSLHPPQVQKPTDPIELSP 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00544 752 MobiDBLite consensus disorder prediction 1 26 - -
Pumo6g00544 752 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 50 735 - -
Pumo6g00544 752 MobiDBLite consensus disorder prediction 265 299 - -
Pumo6g00544 752 FunFam RecQ-mediated instability protein (DUF1767) 104 230 - -
Pumo6g00544 752 Pfam RecQ mediated genome instability protein 59 225 IPR013894 -
Pumo6g00544 752 Gene3D - 104 231 IPR042470 -
Pumo6g00544 752 MobiDBLite consensus disorder prediction 1 18 - -
Pumo6g00544 752 MobiDBLite consensus disorder prediction 265 296 - -
Pumo6g00544 752 SMART DUF1767_2 55 148 IPR033472 -
Pumo6g00544 752 Coils Coil 209 229 - -
Pumo6g00544 752 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 592 733 IPR032199 GO:0000166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00544 K10990 - gmx:100803734 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00544 6 6781961 6786426 Pumo6g00544 6 6781961 6786426 ECH